modENCODE |  Help |  blog

Gene : CG17450 D. melanogaster

DB identifier  ? FBgn0040028 Secondary Identifier  ? CG17450
Source  FlyBase
  • synonyms:
  • FBan0017450,
  • tektin,
  • FBgn0040028

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

3 Alleles

DB identifier Symbol Allele Class Organism
FBal0280976 CG17450[1295]   Drosophila melanogaster
FBal0280977 CG17450[210]   Drosophila melanogaster
FBal0280978 CG17450[787]   Drosophila melanogaster

18 Clones

Secondary Identifier DB identifier
AT16264 FBcl0029141
AT28590 FBcl0030809
AT27715 FBcl0030817
AT15016 FBcl0030819
AT04250 FBcl0030837
AT19190 FBcl0030841
AT04396 FBcl0030847
AT10265 FBcl0030855
AT21774 FBcl0030867
AT10218 FBcl0030875
bs69e06 FBcl0053949
bs72d03 FBcl0053961
GH11003 FBcl0118687
LD08455 FBcl0156655
LP16067 FBcl0185216
LP17029 FBcl0185320
AT17387 FBcl0311179
IP13612 FBcl0318950

5 Exons

DB identifier Symbol
FBgn0040028:5 CG17450:5
FBgn0040028:3 CG17450:3
FBgn0040028:2 CG17450:2
FBgn0040028:1 CG17450:1
FBgn0040028:4 CG17450:4

2 Transcripts

DB identifier Gene
FBtr0070057 CG17450
FBtr0070056 CG17450

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0070057-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0070056-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0070057-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0070056-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
49952, 318227, 318228 NCBI Entrez Gene identifiers FBgn0040028
72488 BioGRID FBgn0040028

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 51.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 62.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 96.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 86.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 51.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 130.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 55.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 90.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 50.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 83.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 59.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 100.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 63.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 137.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 12.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 67.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 86.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 90.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 58.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 128.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 50.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 74.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 105.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 54.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 78.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 22.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 52.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 141.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 117.0
FBgn0040028 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 50.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0040028:5_FBgn0040028:3 Drosophila melanogaster
intron_FBgn0040028:3_FBgn0040028:2 Drosophila melanogaster
intron_FBgn0040028:2_FBgn0040028:1 Drosophila melanogaster
intron_FBgn0040028:4_FBgn0040028:2 Drosophila melanogaster

4 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Heat nociception (1) CG17450 none -1.17   21074052
Heat nociception (1) CG17450 none -1.17   21074052
Heat nociception (1) CG17450 none -1.17   21074052
Glycosylation regulation (4) CG17450 none sp   21203496

0 Submissions