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Gene : CG6040 D. melanogaster

DB identifier  ? FBgn0038679 Secondary Identifier  ? CG6040
Source  FlyBase
  • synonyms:
  • FBgn0038679,
  • CG6040,
  • FBan0006040

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6 Alleles

DB identifier Symbol Allele Class Organism
FBal0265459 CG6040[MI02633]   Drosophila melanogaster
FBal0204925 CG6040[GD9918]   Drosophila melanogaster
FBal0217043 CG6040[A561]   Drosophila melanogaster
FBal0264607 CG6040[MI03373]   Drosophila melanogaster
FBal0233969 CG6040[KK106068]   Drosophila melanogaster
FBal0274947 CG6040[NIG.6040R]   Drosophila melanogaster

47 Clones

Secondary Identifier DB identifier
EK175726 FBcl0055902
EK279262 FBcl0055906
EK162618 FBcl0055916
EK208535 FBcl0055926
EK276509 FBcl0055938
EK073418 FBcl0056000
EK135655 FBcl0056010
EP11360 FBcl0089677
GM03427 FBcl0143724
LP06895 FBcl0184857
LP08738 FBcl0184860
LP24438 FBcl0184861
LP14494 FBcl0184862
LP05394 FBcl0184863
RH05918 FBcl0255231
RH05611 FBcl0255235
RH08586 FBcl0255236
RH08488 FBcl0255240
RH64726 FBcl0255310
RH55586 FBcl0255329
Parral_28_E10 FBcl0394404
EK291562 FBcl0311228
CK01.94B.E3 FBcl0468099
CK01.2A.B6 FBcl0468052
RP004391744 FBcl0548340
RP004071196 FBcl0548341
RP004440482 FBcl0548342
RP004251589 FBcl0548343
RP004027033 FBcl0548344
RP004091720 FBcl0548345

8 Exons

DB identifier Symbol
FBgn0038679:1 CG6040:1
FBgn0038679:2 CG6040:2
FBgn0038679:3 CG6040:3
FBgn0038679:4 CG6040:4
FBgn0038679:5 CG6040:5
FBgn0038679:6 CG6040:6
FBgn0038679:7 CG6040:7
FBgn0038679:8 CG6040:8

1 Transcripts

DB identifier Gene
FBtr0083729 CG6040

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0083729-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0083729-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42292 NCBI Entrez Gene identifiers FBgn0038679
67290 BioGRID FBgn0038679

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 75.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 66.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 640.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 603.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 716.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 87.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 90.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 58.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 129.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 53.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 49.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 928.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 237.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 114.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 961.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 124.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 529.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 324.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 127.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 267.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 481.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 48.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 63.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 51.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 133.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 65.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 66.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 53.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 72.0
FBgn0038679 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 198.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0038679:1_FBgn0038679:2 Drosophila melanogaster
intron_FBgn0038679:2_FBgn0038679:3 Drosophila melanogaster
intron_FBgn0038679:3_FBgn0038679:4 Drosophila melanogaster
intron_FBgn0038679:4_FBgn0038679:5 Drosophila melanogaster
intron_FBgn0038679:5_FBgn0038679:6 Drosophila melanogaster
intron_FBgn0038679:6_FBgn0038679:7 Drosophila melanogaster
intron_FBgn0038679:7_FBgn0038679:8 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG6040 none 0.277103035   19067489
Lipid storage CG6040 none -0.823669617   19067489
Cell size and cell-cycle regulation (1) CG6040 none sp   16496002
Cell size and cell-cycle regulation (1) CG6040 none sp   16496002
Muscle morphogenesis and function (1) CG6040 none np   20220848
Heat nociception (1) CG6040 none -1.17   21074052
Heart development and function (1) CG6040 none 1   20371351
Serratia marcescens infection (1) CG6040 none -0.0483870967741935   19520911
Notch pathway regulation (4) CG6040 Gain of bristles 0.1   19363474
Adiposity regulation (1) CG6040 none -0.292   20074523
Wg pathway regulation (1) CG6040 Decreased WgRluc and not changed sFluc protein expression weak   21886182
Hippo pathway regulation CG6040 none 0.17   23263283
Glycosylation regulation (1) CG6040 Decreased alpha1,3-fucose Chp glycosylation, decreased GlcNAcb1-4GlcNAc Chp glycosylation sp   21203496
Glycosylation regulation (2) CG6040 none np   21203496

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