modENCODE |  Help |  blog

Gene : CG4848 D. melanogaster
DB identifier  ? FBgn0037998 Secondary Identifier  ? CG4848
Source  FlyBase
  • synonyms:
  • FBgn0037998,
  • FBan0004848,
  • CG4848
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

6 Alleles

DB identifier Symbol Allele Class Organism
FBal0185539 CG4848[f06928]   Drosophila melanogaster
FBal0185540 CG4848[f06192]   Drosophila melanogaster
FBal0185541 CG4848[f03759]   Drosophila melanogaster
FBal0161359 CG4848[e02840]   Drosophila melanogaster
FBal0278974 CG4848[HMS01857]   Drosophila melanogaster
FBal0204441 CG4848[GD11447]   Drosophila melanogaster

83 Clones

Secondary Identifier DB identifier
ESG0115a.B21_F08 FBcl0007879
EK307311 FBcl0024416
EK025039 FBcl0025698
EK023151 FBcl0025848
EK113824 FBcl0014964
EK069719 FBcl0015010
EK069731 FBcl0015026
EK048207 FBcl0015038
EK113930 FBcl0015096
EK069209 FBcl0015168
AT11266 FBcl0045875
AT05787 FBcl0045965
AT06263 FBcl0045999
AT05095 FBcl0046019
AT20792 FBcl0046033
AT13354 FBcl0046035
EP18963 FBcl0090089
GH23636 FBcl0134555
GH12547 FBcl0134583
GH09419 FBcl0134585
LP01478 FBcl0190955
LP03684 FBcl0191034
RE37145 FBcl0236396
RH10825 FBcl0272801
RH12052 FBcl0272805
SD18377 FBcl0292325
SD28031 FBcl0292327
IP17220 FBcl0319907
Dmel_dig_006497_0691_1534 FBcl0368849
CK01.41C.F12 FBcl0455329

7 Exons

DB identifier Symbol
FBgn0037998:7 CG4848:7
FBgn0037998:6 CG4848:6
FBgn0037998:5 CG4848:5
FBgn0037998:4 CG4848:4
FBgn0037998:2 CG4848:2
FBgn0037998:3 CG4848:3
FBgn0037998:1 CG4848:1

3 Transcripts

DB identifier Gene
FBtr0082624 CG4848
FBtr0334596 CG4848
FBtr0334597 CG4848

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0082624-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334596-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334597-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0082624-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334596-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334597-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
41479 NCBI Entrez Gene identifiers FBgn0037998
66592 BioGRID FBgn0037998

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 491.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 591.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 428.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 571.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 691.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 341.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1088.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 626.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 487.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 601.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 520.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 351.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 507.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 345.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 494.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 535.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 613.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1032.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 607.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 619.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 729.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 482.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 426.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 498.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 765.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 877.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 348.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 368.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 420.0
FBgn0037998 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 441.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0037998:7_FBgn0037998:6 Drosophila melanogaster
intron_FBgn0037998:6_FBgn0037998:5 Drosophila melanogaster
intron_FBgn0037998:5_FBgn0037998:4 Drosophila melanogaster
intron_FBgn0037998:4_FBgn0037998:1 Drosophila melanogaster
intron_FBgn0037998:4_FBgn0037998:2 Drosophila melanogaster
intron_FBgn0037998:4_FBgn0037998:3 Drosophila melanogaster
intron_FBgn0037998:3_FBgn0037998:2 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG4848 none 0.029556466   19067489
Lipid storage CG4848 none -0.703899661   19067489
Cell size and cell-cycle regulation (1) CG4848 none sp   16496002
Cell size and cell-cycle regulation (1) CG4848 none sp   16496002
Muscle morphogenesis and function (1) CG4848 none np   20220848
Muscle morphogenesis and function (1) CG4848 none np   20220848
Heart development and function (1) CG4848 none 1   20371351
Heart development and function (1) CG4848 none 1   20371351
Serratia marcescens infection (1) CG4848 none 0.510204081632653   19520911
Notch pathway regulation (4) CG4848 none 0   19363474
Notch pathway regulation (4) CG4848 none 0   19363474
Adiposity regulation (1) CG4848 none -0.024   20074523
Hippo pathway regulation CG4848 none -1   23263283

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom