modENCODE |  Help |  blog

Gene : CG9300 D. melanogaster

DB identifier  ? FBgn0036886 Secondary Identifier  ? CG9300
Source  FlyBase
  • synonyms:
  • FBan0009300,
  • CG9300,
  • FBgn0036886

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

4 Alleles

DB identifier Symbol Allele Class Organism
FBal0198301 CG9300[MB04640]   Drosophila melanogaster
FBal0206174 CG9300[GD14180]   Drosophila melanogaster
FBal0232508 CG9300[KK103751]   Drosophila melanogaster
FBal0276360 CG9300[NIG.9300R]   Drosophila melanogaster

178 Clones

Secondary Identifier DB identifier
EK196517 FBcl0136558
EK292345 FBcl0137356
EK068419 FBcl0137374
EK097130 FBcl0137376
EK096962 FBcl0137378
GM02919 FBcl0140543
LD01043 FBcl0153359
LD11905 FBcl0153360
LD04713 FBcl0153361
LD26059 FBcl0166227
LD22774 FBcl0166229
LD21924 FBcl0166231
LD29559 FBcl0166232
LD26762 FBcl0166233
LD35028 FBcl0166234
RE03704 FBcl0201418
RE36275 FBcl0201422
RE37467 FBcl0201425
RE48382 FBcl0201428
RE14040 FBcl0201429
RE34051 FBcl0201430
RE19650 FBcl0201433
RE54593 FBcl0201434
SD26941 FBcl0281518
CK01.86D.E5 FBcl0450286
CK01.36C.F8 FBcl0450294
CK01.126B.H12 FBcl0450302
CK01.126D.H3 FBcl0450304
RP003622173 FBcl0690624
RP003152933 FBcl0690625

4 Exons

DB identifier Symbol
FBgn0036886:1 CG9300:1
FBgn0036886:2 CG9300:2
FBgn0036886:3 CG9300:3
FBgn0036886:4 CG9300:4

1 Transcripts

DB identifier Gene
FBtr0074938 CG9300

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0074938-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074938-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
40128 NCBI Entrez Gene identifiers FBgn0036886
65398 BioGRID FBgn0036886

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 521.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 490.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 260.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 320.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 387.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 290.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 556.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 362.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 253.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 256.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 169.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 345.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 329.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 285.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 504.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 249.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 228.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 388.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 501.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 351.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 349.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 379.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 349.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 212.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 405.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 616.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 690.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 687.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 533.0
FBgn0036886 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 552.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0036886:1_FBgn0036886:2 Drosophila melanogaster
intron_FBgn0036886:2_FBgn0036886:3 Drosophila melanogaster
intron_FBgn0036886:3_FBgn0036886:4 Drosophila melanogaster

22 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Cell size regulation CG9300 Decreased cell size -2.15   19216764
Lipid storage CG9300 none -0.025256886   19067489
Lipid storage CG9300 none -0.012505117   19067489
Lipid storage CG9300 none 0.257138402   19067489
Drosophila C virus infection CG9300 Drosophila C virus replication down np   17040126
Cell size and cell-cycle regulation (1) CG9300 none sp   16496002
Muscle morphogenesis and function (1) CG9300 Lethal np   20220848
Muscle morphogenesis and function (2) CG9300 Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Muscle morphogenesis and function (3) CG9300 none np   20220848
Heat nociception (1) CG9300 none -1.17   21074052
Heart development and function (1) CG9300 none 1   20371351
Serratia marcescens infection (1) CG9300 none -0.341772151898734   19520911
Notch pathway regulation (4) CG9300 Completely lethal (pupal) sp   19363474
Notch pathway regulation (1) CG9300 Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) CG9300 Lethal strong en-GAL4 20493818
Notch pathway regulation (2) CG9300 Downregulation of Notch pathway; adult wing margin: notches sp C96-GAL4 20493818
Notch pathway regulation (2) CG9300 Up- and downregulation of Notch pathway; wing disc NRE:EGFP: up, gap; wing disc myrRFP: reduced; lethal sp en-GAL4 20493818
Notch pathway regulation (3) CG9300 none np   20493818
Adiposity regulation (1) CG9300 none -0.084   20074523
Hippo pathway regulation CG9300 none np   23263283
Glycosylation regulation (1) CG9300 none sp   21203496
Huntingtin (Htt) aggregates formation CG9300 Decreased formation of mutant Huntingtin (Httex1-Qn) protein aggregates np   20100940

0 Submissions