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Gene : Sox21a D. melanogaster

DB identifier  ? FBgn0036411 Secondary Identifier  ? CG7345
Name  ? Sox21a Source  FlyBase
  • synonyms:
  • CG7345,
  • FBan0007345,
  • Sox21,
  • Sox B2-3,
  • Sox21a,
  • SOXB2.3,
  • FBgn0036411,
  • FBgn0043568

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3 Alleles

DB identifier Symbol Allele Class Organism
FBal0244870 Sox21a[JF02191]   Drosophila melanogaster
FBal0208583 Sox21a[GD4390]   Drosophila melanogaster
FBal0237512 Sox21a[KK111576]   Drosophila melanogaster

17 Clones

Secondary Identifier DB identifier
EK268635 FBcl0020314
EK273109 FBcl0020486
EK268633 FBcl0020528
EK189222 FBcl0022210
EK184117 FBcl0022294
IP01552 FBcl0293851
EC00485 FBcl0349351
EP18441 FBcl0357060
EK094815 FBcl0357061
EK165209 FBcl0357062
CK01.124D.D5 FBcl0456612
214509.47 FBcl0456594
55911 FBcl0456615
214289.48 FBcl0456603
63306 FBcl0456610
164293 FBcl0456619
DPiM_IP01552 FBcl0738920

3 Exons

DB identifier Symbol
FBgn0036411:3 Sox21a:3
FBgn0036411:2 Sox21a:2
FBgn0036411:1 Sox21a:1

2 Transcripts

DB identifier Gene
FBtr0075748 Sox21a
FBtr0330178 Sox21a

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0075748-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330178-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075748-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330178-3-prime-utr Drosophila melanogaster

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39567 NCBI Entrez Gene identifiers FBgn0036411
64903 BioGRID FBgn0036411

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 9.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 30.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 12.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 17.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 12.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 4.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 18.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 46.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 19.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 29.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 10.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 11.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 4.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 12.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 0.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 104.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 88.0
FBgn0036411 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 56.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0036411:3_FBgn0036411:2 Drosophila melanogaster
intron_FBgn0036411:2_FBgn0036411:1 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Sox21a none 0.050938852   19067489
Lipid storage Sox21a none -0.003267915   19067489
Candida albicans phagocytosis (1) Sox21a Decreased Candida albicans phagocytosis np   16336044
Candida albicans phagocytosis (2) Sox21a Decreased Escherichia coli phagocytosis 44   16336044
Candida albicans phagocytosis (3) Sox21a Decreased latex beads phagocytosis 44   16336044
Dendrite pattern formation Sox21a none np   16547170
Muscle morphogenesis and function (1) Sox21a none np   20220848
Heat nociception (1) Sox21a none -1.17   21074052
Heart development and function (1) Sox21a none 1   20371351
Serratia marcescens infection (1) Sox21a none -0.258823529411764   19520911
Notch pathway regulation (4) Sox21a Bristle morphology defects 3   19363474
Adiposity regulation (1) Sox21a none -0.086   20074523
RTK-Ras-ERK pathway regulation (1) Sox21a none 1.39 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Sox21a none -0.75 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Sox21a none 0.05 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Sox21a Increased ERK phosphorylation after sSpitz and EGF stimulation 1.59 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation Sox21a none 0.4   23263283

0 Submissions