modENCODE |  Help |  blog

Gene : CG11593 D. melanogaster

DB identifier  ? FBgn0035488 Secondary Identifier  ? CG11593
Source  FlyBase
  • synonyms:
  • FBgn0035488,
  • FBgn0027676,
  • CG11593,
  • FBan0011593,
  • anon-EST:Posey64

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

6 Alleles

DB identifier Symbol Allele Class Organism
FBal0257398 CG11593[HMS00715]   Drosophila melanogaster
FBal0162548 CG11593[d06001]   Drosophila melanogaster
FBal0199488 CG11593[GD7338]   Drosophila melanogaster
FBal0270921 CG11593[NIG.11593R]   Drosophila melanogaster
FBal0231196 CG11593[KK101321]   Drosophila melanogaster
FBal0258172 CG11593[t15.3]   Drosophila melanogaster

38 Clones

Secondary Identifier DB identifier
AF171782 FBcl0000335
AT30794 FBcl0016939
AT03892 FBcl0017233
AT30309 FBcl0017417
EP18414 FBcl0078561
EK245429 FBcl0079286
EK180713 FBcl0079304
EK064206 FBcl0079328
EK061332 FBcl0079340
EK019040 FBcl0079346
EK069204 FBcl0079358
EK066028 FBcl0083964
GH11408 FBcl0105773
GM15429 FBcl0145261
LD28166 FBcl0164550
LP05112 FBcl0180422
LP03739 FBcl0180915
RE15786 FBcl0196333
RE51931 FBcl0196336
RE46842 FBcl0196340
RH39536 FBcl0243719
RH38709 FBcl0243720
SD27708 FBcl0280655
CK01.78D.C10 FBcl0419703
Dmel_dig_006262_0692_2703 FBcl0380630
CK01.20A.F8 FBcl0419682
RP004255384 FBcl0663015
RP004418179 FBcl0663016
RP004222059 FBcl0663018
RP004266615 FBcl0663020

5 Exons

DB identifier Symbol
FBgn0035488:5 CG11593:5
FBgn0035488:3 CG11593:3
FBgn0035488:2 CG11593:2
FBgn0035488:4 CG11593:4
FBgn0035488:1 CG11593:1

2 Transcripts

DB identifier Gene
FBtr0114509 CG11593
FBtr0332982 CG11593

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0114509-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0332982-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0114509-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0332982-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
38477 NCBI Entrez Gene identifiers FBgn0035488
63960 BioGRID FBgn0035488

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 436.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 317.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 351.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 416.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 400.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 217.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 519.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 548.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 545.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 556.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 483.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 380.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 421.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 423.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 403.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 548.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 459.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 393.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 313.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 450.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 434.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 325.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 403.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 669.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 333.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1427.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 605.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 820.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 551.0
FBgn0035488 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 393.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0035488:5_FBgn0035488:3 Drosophila melanogaster
intron_FBgn0035488:3_FBgn0035488:2 Drosophila melanogaster
intron_FBgn0035488:2_FBgn0035488:1 Drosophila melanogaster
intron_FBgn0035488:4_FBgn0035488:3 Drosophila melanogaster

21 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG11593 none 0.575339546   19067489
Lipid storage CG11593 none -0.290796335   19067489
Cell size and cell-cycle regulation (1) CG11593 none sp   16496002
Muscle morphogenesis and function (1) CG11593 none np   20220848
Muscle morphogenesis and function (1) CG11593 none np   20220848
Heat nociception (1) CG11593 none 0.49   21074052
Heat nociception (1) CG11593 none -0.38   21074052
Heat nociception (1) CG11593 none -0.94   21074052
Heat nociception (1) CG11593 Lethal -0.85   21074052
Heart development and function (1) CG11593 none 1   20371351
Serratia marcescens infection (1) CG11593 none -0.0714285714285714   19520911
Serratia marcescens infection (1) CG11593 none 0.22680412371134   19520911
Serratia marcescens infection (1) CG11593 Decreased viability after Serratia marcescens infection -2.61764705882352   19520911
Notch pathway regulation (4) CG11593 Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) CG11593 Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) CG11593 Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) CG11593 Completely lethal (pupal) sp   19363474
Adiposity regulation (1) CG11593 none -0.07   20074523
Adiposity regulation (1) CG11593 none 0.11   20074523
Hippo pathway regulation CG11593 none 0.7   23263283
Glycosylation regulation (1) CG11593 none sp   21203496

0 Submissions