modENCODE |  Help |  blog

Gene : CG5869 D. melanogaster
DB identifier  ? FBgn0028894 Secondary Identifier  ? CG5869
Source  FlyBase
  • synonyms:
  • BcDNA:SD03793,
  • FBgn0062894,
  • FBgn0028894,
  • FBan0005869,
  • DS02740.9,
  • BG:DS02740.9
Paste the following link
Lists
This Gene is in one list:
Fly classII (760)

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

5 Alleles

DB identifier Symbol Allele Class Organism
FBal0161227 CG5869[t14.2]   Drosophila melanogaster
FBal0161228 CG5869[t12.1]   Drosophila melanogaster
FBal0220061 CG5869[G2885]   Drosophila melanogaster
FBal0204855 CG5869[GD10559]   Drosophila melanogaster
FBal0235783 CG5869[KK108743]   Drosophila melanogaster

40 Clones

Secondary Identifier DB identifier
EP10224 FBcl0087795
EK197958 FBcl0100794
EK170706 FBcl0100800
EK252038 FBcl0100812
EK141038 FBcl0100818
EK303636 FBcl0100832
EN00261 FBcl0101151
EK298917 FBcl0101232
EK203623 FBcl0101592
EK230255 FBcl0101910
LP21858 FBcl0186470
RE40543 FBcl0219124
RE13271 FBcl0219145
RE24050 FBcl0219170
RE46693 FBcl0219173
SD03793 FBcl0290541
CK01.40D.H11 FBcl0430583
473579 FBcl0430581
RP003034704 FBcl0610099
RP003430074 FBcl0610074
RP003064989 FBcl0610079
RP003198770 FBcl0610081
RP003170204 FBcl0610085
RP003503206 FBcl0610086
RP003471463 FBcl0610087
RP003263542 FBcl0610088
RP003192874 FBcl0610089
RP003167290 FBcl0610091
RP003278601 FBcl0610093
RP003349336 FBcl0610094

4 Exons

DB identifier Symbol
FBgn0028894:4 CG5869:4
FBgn0028894:3 CG5869:3
FBgn0028894:2 CG5869:2
FBgn0028894:1 CG5869:1

1 Transcripts

DB identifier Gene
FBtr0080851 CG5869

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080851-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080851-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
34963 NCBI Entrez Gene identifiers FBgn0028894
60974 BioGRID FBgn0028894

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1584.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1176.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 891.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1070.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1819.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1552.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1415.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1576.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1921.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3059.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2626.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1909.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2687.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1386.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 704.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1167.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1344.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1062.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3501.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1624.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1364.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1417.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1357.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2000.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1417.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1587.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1711.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2487.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1636.0
FBgn0028894 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2945.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0028894:4_FBgn0028894:3 Drosophila melanogaster
intron_FBgn0028894:3_FBgn0028894:2 Drosophila melanogaster
intron_FBgn0028894:2_FBgn0028894:1 Drosophila melanogaster

10 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG5869 none -0.001270066   19067489
Lipid storage CG5869 none -1.041565389   19067489
Cell size and cell-cycle regulation (1) CG5869 none sp   16496002
Muscle morphogenesis and function (1) CG5869 none np   20220848
Heat nociception (1) CG5869 none -1.17   21074052
Heart development and function (1) CG5869 none 1   20371351
Serratia marcescens infection (1) CG5869 none 0.1   19520911
Notch pathway regulation (4) CG5869 Loss of bristles 0.666666667   19363474
Adiposity regulation (1) CG5869 none -0.304   20074523
Hippo pathway regulation CG5869 none 0.98   23263283

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom