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Gene : Atf3 D. melanogaster

DB identifier  ? FBgn0028550 Secondary Identifier  ? CG11405
Name  ? Activating transcription factor 3 Source  FlyBase
  • synonyms:
  • FBgn0026877,
  • CG11405,
  • Activating transcription factor 3,
  • FBgn0028550,
  • FBan0011405,
  • A3-3,
  • ATF3,
  • EG:33C11.1,
  • dATF3

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20 Alleles

DB identifier Symbol Allele Class Organism
FBal0277813 Atf3[CH321-51N24.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0249147 Atf3[MI01026]   Drosophila melanogaster
FBal0157522 Atf3[EY02562]   Drosophila melanogaster
FBal0245992 Atf3[Scer\UAS.cSa]   Drosophila melanogaster
FBal0245993 Atf3[76]   Drosophila melanogaster
FBal0265410 Atf3[BG02626]   Drosophila melanogaster
FBal0270853 Atf3[NIG.11405R]   Drosophila melanogaster
FBal0223227 Atf3[c03199]   Drosophila melanogaster
FBal0188342 Atf3[e00645]   Drosophila melanogaster
FBal0223229 Atf3[e02490]   Drosophila melanogaster
FBal0223231 Atf3[GG01661]   Drosophila melanogaster
FBal0220673 Atf3[JF02303]   Drosophila melanogaster
FBal0223228 Atf3[c04578]   Drosophila melanogaster
FBal0213276 Atf3[GD7289]   Drosophila melanogaster
FBal0100468 Atf3[1]   Drosophila melanogaster
FBal0238576 Atf3[KK113077]   Drosophila melanogaster
FBal0157523 Atf3[BG02445]   Drosophila melanogaster
FBal0223230 Atf3[e03344]   Drosophila melanogaster
FBal0223226 Atf3[KG07462]   Drosophila melanogaster
FBal0280013 Atf3[T:Avic\GFP-SF,T:Zzzz\FLAG,T:Zzzz\PSP.CS,T:Zzzz\TEV.CS,T:Zzzz\BLRP]   Drosophila melanogaster

45 Clones

Secondary Identifier DB identifier
CK01.118D.C3 FBcl0418817
EK194130 FBcl0059082
EK090110 FBcl0059118
EK227874 FBcl0059324
EK206501 FBcl0059516
EK091314 FBcl0059524
EK177806 FBcl0059538
EK054228 FBcl0059784
EK065663 FBcl0059822
EK113111 FBcl0060018
EK295933 FBcl0060040
EK293433 FBcl0060090
EK199459 FBcl0060264
EK218345 FBcl0060396
EK178932 FBcl0060428
EP09420 FBcl0076813
GH24653 FBcl0128171
RE25862 FBcl0227402
RH03831 FBcl0266292
RH01850 FBcl0266294
RH24948 FBcl0266300
RH02370 FBcl0266306
RH57783 FBcl0266311
RH02732 FBcl0266314
RH02925 FBcl0266317
RH49092 FBcl0266322
RH67685 FBcl0266343
RH66242 FBcl0266361
RH02728 FBcl0266366
RH57789 FBcl0266396

6 Exons

DB identifier Symbol
FBgn0028550:5 Atf3:5
FBgn0028550:6 Atf3:6
FBgn0028550:4 Atf3:4
FBgn0028550:3 Atf3:3
FBgn0028550:2 Atf3:2
FBgn0028550:1 Atf3:1

2 Transcripts

DB identifier Gene
FBtr0070244 Atf3
FBtr0330391 Atf3

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0070244-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330391-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0070244-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330391-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43867 NCBI Entrez Gene identifiers FBgn0028550
68679 BioGRID FBgn0028550

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 601.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 499.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 840.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 934.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1414.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2070.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 950.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 435.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1859.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2684.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1066.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 491.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1282.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 800.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 625.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 478.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2762.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 336.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 585.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 593.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1523.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 231.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 434.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 904.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 374.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 252.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 298.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 252.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 418.0
FBgn0028550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 100.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0028550:6_FBgn0028550:5 Drosophila melanogaster
intron_FBgn0028550:5_FBgn0028550:4 Drosophila melanogaster
intron_FBgn0028550:4_FBgn0028550:3 Drosophila melanogaster
intron_FBgn0028550:3_FBgn0028550:2 Drosophila melanogaster
intron_FBgn0028550:2_FBgn0028550:1 Drosophila melanogaster
intron_FBgn0028550:6_FBgn0028550:4 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Atf3 none 2.896860111   19067489
Lipid storage Atf3 none 1.535498371   19067489
Lipid storage Atf3 none 0.067182267   19067489
Lipid storage Atf3 none 0.454520962   19067489
Hedgehog signaling Atf3 Decreased Hedgehog reporter activity -2.01   16311596
Cell size and cell-cycle regulation (1) Atf3 none sp   16496002
Cell size and cell-cycle regulation (1) Atf3 none sp   16496002
Combinatorial effect with methyl methanesulphonate (1) Atf3 Synthetic lethal with methyl methanesulphonate sp   19543366
Combinatorial effect with methyl methanesulphonate (2) Atf3 none sp   19543366
Embryonic nervous system development Atf3 Disturbed development of nervous system np   17376868
Hh pathway regulation Atf3 none -0.24555576470102   17903264
Hh pathway regulation Atf3 none -0.125914533378009   17903264
Blood cell homeostasis regulation (1) Atf3 none np   20540764
Blood cell homeostasis regulation (2) Atf3 none np   20540764
Hippo pathway regulation Atf3 none -0.43   23263283
Glycosylation regulation (1) Atf3 none sp   21203496

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