modENCODE |  Help |  blog

Gene : Bub3 D. melanogaster

DB identifier  ? FBgn0025457 Secondary Identifier  ? CG7581
Name  ? Bub3 Source  FlyBase
  • synonyms:
  • FBgn0025457,
  • CG7581,
  • BUB3,
  • dBUB3,
  • Dmbub3,
  • FBan0007581

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

8 Alleles

DB identifier Symbol Allele Class Organism
FBal0220512 Bub3[1]   Drosophila melanogaster
FBal0257470 Bub3[HMS00789]   Drosophila melanogaster
FBal0198512 Bub3[T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0148370 Bub3[233]   Drosophila melanogaster
FBal0287502 Bub3[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0198851 Bub3[GD9924]   Drosophila melanogaster
FBal0279190 Bub3[HMS02158]   Drosophila melanogaster
FBal0275631 Bub3[NIG.7581R]   Drosophila melanogaster

104 Clones

Secondary Identifier DB identifier
EK166802 FBcl0009656
EC29290 FBcl0065863
EC22890 FBcl0065865
EK151056 FBcl0139334
GM01720 FBcl0140589
EK089859 FBcl0141374
EK209534 FBcl0141548
EK256342 FBcl0141554
EK087004 FBcl0141570
LD07449 FBcl0155520
LD03679 FBcl0155525
LD23540 FBcl0169037
RE63501 FBcl0209926
RE73738 FBcl0209927
RE70373 FBcl0209941
RE69051 FBcl0209952
RE52688 FBcl0209953
SD12204 FBcl0281611
EC054285 FBcl0299314
FGM313H06 FBcl0393087
CK01.118C.G6 FBcl0420267
FI07632 FBcl0702842
RP003155743 FBcl0571104
RP003375383 FBcl0571045
RP003268763 FBcl0571114
RP003385421 FBcl0571046
RP003235356 FBcl0571047
RP003315509 FBcl0571048
RP003315946 FBcl0571049
RP003487871 FBcl0571050

3 Exons

DB identifier Symbol
FBgn0025457:3 Bub3:3
FBgn0025457:2 Bub3:2
FBgn0025457:1 Bub3:1

2 Transcripts

DB identifier Gene
FBtr0085465 Bub3
FBtr0339148 Bub3

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085465-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0339148-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085465-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0339148-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43490 NCBI Entrez Gene identifiers FBgn0025457
68354 BioGRID FBgn0025457

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2492.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2645.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1700.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2975.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2403.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1354.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 541.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2181.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1601.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2008.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1936.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1777.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1264.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2553.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2302.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1989.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2078.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1347.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2461.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1944.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2216.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2366.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1762.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1310.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1082.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 3296.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 3652.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 4185.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2869.0
FBgn0025457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1851.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0025457:3_FBgn0025457:2 Drosophila melanogaster
intron_FBgn0025457:3_FBgn0025457:1 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Bub3 none 0.254773427   19067489
L. monocytogenes infection Bub3 Fewer infected cells, fewer bacteria per cell **   16157870
Cell size and cell-cycle regulation (1) Bub3 none sp   16496002
Mitosis Bub3 Chromosome misalignment np   17412918
Mitochondrial biogenesis and function Bub3 Decreased mitochondrial citrate synthase activity 0.67   18042644
Microtubule assembly and organization Bub3 none np   18463163
Muscle morphogenesis and function (1) Bub3 none np   20220848
Heat nociception (1) Bub3 none -1.17   21074052
Heart development and function (1) Bub3 none 1   20371351
Serratia marcescens infection (1) Bub3 none 0.403225806451612   19520911
Notch pathway regulation (4) Bub3 Loss of bristles, bristle morphology defects sp   19363474
Adiposity regulation (1) Bub3 none -0.102   20074523
Hippo pathway regulation Bub3 none -1.03   23263283
Glycosylation regulation (1) Bub3 none sp   21203496
Huntingtin (Htt) aggregates formation Bub3 Decreased formation of mutant Huntingtin (Httex1-Qn) protein aggregates np   20100940

0 Submissions