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Gene : lig D. melanogaster

DB identifier  ? FBgn0020279 Secondary Identifier  ? CG8715
Name  ? lingerer Source  FlyBase
  • synonyms:
  • FBgn0020279,
  • FBgn0033253,
  • CG8715,
  • FBan0008715,
  • transcription unit A

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20 Alleles

DB identifier Symbol Allele Class Organism
FBal0179057 lig[e01589]   Drosophila melanogaster
FBal0179058 lig[d01556]   Drosophila melanogaster
FBal0179056 lig[f03269]   Drosophila melanogaster
FBal0162006 lig[e04268]   Drosophila melanogaster
FBal0143338 lig[PP3] loss of function allele Drosophila melanogaster
FBal0143339 lig[PP2] loss of function allele Drosophila melanogaster
FBal0143340 lig[PP1] loss of function allele Drosophila melanogaster
FBal0062589 lig[P1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0143336 lig[PP5] loss of function allele Drosophila melanogaster
FBal0143337 lig[PP4] loss of function allele Drosophila melanogaster
FBal0147045 lig[KG08209]   Drosophila melanogaster
FBal0243987 lig[A.Elig]   Drosophila melanogaster
FBal0143341 lig[1.hs]   Drosophila melanogaster
FBal0143342 lig[+t12]   Drosophila melanogaster
FBal0143335 lig[R11]   Drosophila melanogaster
FBal0143334 lig[R4]   Drosophila melanogaster
FBal0215012 lig[GD14008]   Drosophila melanogaster
FBal0288095 lig[s-58]   Drosophila melanogaster
FBal0222237 lig[NP2528]   Drosophila melanogaster
FBal0235368 lig[KK108129]   Drosophila melanogaster

187 Clones

Secondary Identifier DB identifier
AT31976 FBcl0029779
AT16468 FBcl0030027
AT01070 FBcl0030029
AT27395 FBcl0030033
AT19904 FBcl0030035
EC00829 FBcl0069317
EC00429 FBcl0069321
EP06511 FBcl0084683
EP07811 FBcl0084685
EP04428 FBcl0084693
EP03838 FBcl0084699
EN17815 FBcl0098159
GH03681 FBcl0129673
EK064651 FBcl0134550
EK134118 FBcl0134578
EK089718 FBcl0134846
EK069013 FBcl0134854
EK013338 FBcl0134856
EK281126 FBcl0134860
EK120462 FBcl0134870
EK193437 FBcl0134872
EK079159 FBcl0134874
EK086857 FBcl0134878
EK154406 FBcl0134930
EK130157 FBcl0134932
EK234221 FBcl0134934
EK179940 FBcl0134938
GM03857 FBcl0142338
HL03075 FBcl0150329
LD11576 FBcl0160147

24 Exons

DB identifier Symbol
FBgn0020279:3 lig:3
FBgn0020279:7 lig:7
FBgn0020279:8 lig:8
FBgn0020279:9 lig:9
FBgn0020279:10 lig:10
FBgn0020279:11 lig:11
FBgn0020279:12 lig:12
FBgn0020279:13 lig:13
FBgn0020279:15 lig:15
FBgn0020279:17 lig:17
FBgn0020279:18 lig:18
FBgn0020279:20 lig:20
FBgn0020279:21 lig:21
FBgn0020279:23 lig:23
FBgn0020279:24 lig:24
FBgn0020279:6 lig:6
FBgn0020279:22 lig:22
FBgn0020279:1 lig:1
FBgn0020279:2 lig:2
FBgn0020279:4 lig:4
FBgn0020279:5 lig:5
FBgn0020279:19 lig:19
FBgn0020279:14 lig:14
FBgn0020279:16 lig:16

11 Transcripts

DB identifier Gene
FBtr0088774 lig
FBtr0301917 lig
FBtr0100575 lig
FBtr0301915 lig
FBtr0301916 lig
FBtr0088776 lig
FBtr0330630 lig
FBtr0330631 lig
FBtr0304681 lig
FBtr0304682 lig
FBtr0088775 lig

22 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0088776-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100575-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0088774-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0088775-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301915-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301916-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301917-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304681-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304682-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330630-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330631-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088776-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100575-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088774-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088775-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301915-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301916-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301917-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304681-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304682-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330630-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330631-3-prime-utr Drosophila melanogaster

Interactions

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0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
35771 NCBI Entrez Gene identifiers FBgn0020279
61631 BioGRID FBgn0020279

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 6055.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 5635.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 4050.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 5801.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 4652.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 4149.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 4594.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 5717.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 3629.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 5186.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 5084.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 4127.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 7124.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 6057.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 6675.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 6375.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 5667.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 5802.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 6638.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 4589.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 6581.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 5509.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 4359.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 3443.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 3853.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 8415.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 7950.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 7646.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 4326.0
FBgn0020279 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 4626.0

29 Introns

DB identifier
Organism . Name
intron_FBgn0020279:1_FBgn0020279:7 Drosophila melanogaster
intron_FBgn0020279:7_FBgn0020279:8 Drosophila melanogaster
intron_FBgn0020279:8_FBgn0020279:9 Drosophila melanogaster
intron_FBgn0020279:9_FBgn0020279:10 Drosophila melanogaster
intron_FBgn0020279:10_FBgn0020279:11 Drosophila melanogaster
intron_FBgn0020279:11_FBgn0020279:12 Drosophila melanogaster
intron_FBgn0020279:12_FBgn0020279:13 Drosophila melanogaster
intron_FBgn0020279:13_FBgn0020279:15 Drosophila melanogaster
intron_FBgn0020279:15_FBgn0020279:17 Drosophila melanogaster
intron_FBgn0020279:17_FBgn0020279:18 Drosophila melanogaster
intron_FBgn0020279:18_FBgn0020279:20 Drosophila melanogaster
intron_FBgn0020279:20_FBgn0020279:21 Drosophila melanogaster
intron_FBgn0020279:21_FBgn0020279:23 Drosophila melanogaster
intron_FBgn0020279:23_FBgn0020279:24 Drosophila melanogaster
intron_FBgn0020279:1_FBgn0020279:5 Drosophila melanogaster
intron_FBgn0020279:5_FBgn0020279:7 Drosophila melanogaster
intron_FBgn0020279:21_FBgn0020279:24 Drosophila melanogaster
intron_FBgn0020279:6_FBgn0020279:8 Drosophila melanogaster
intron_FBgn0020279:20_FBgn0020279:22 Drosophila melanogaster
intron_FBgn0020279:4_FBgn0020279:7 Drosophila melanogaster
intron_FBgn0020279:3_FBgn0020279:7 Drosophila melanogaster
intron_FBgn0020279:15_FBgn0020279:16 Drosophila melanogaster
intron_FBgn0020279:16_FBgn0020279:18 Drosophila melanogaster
intron_FBgn0020279:10_FBgn0020279:13 Drosophila melanogaster
intron_FBgn0020279:18_FBgn0020279:19 Drosophila melanogaster
intron_FBgn0020279:19_FBgn0020279:21 Drosophila melanogaster
intron_FBgn0020279:13_FBgn0020279:14 Drosophila melanogaster
intron_FBgn0020279:14_FBgn0020279:17 Drosophila melanogaster
intron_FBgn0020279:2_FBgn0020279:7 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage lig none -1.279659624   19067489
Lipid storage lig none -0.33825265   19067489
Lipid storage lig none -0.593018569   19067489
Lipid storage lig none 2.605759878   19067489
ERK signaling lig ERK activation reduced weak   17086199
Cell size and cell-cycle regulation (1) lig none sp   16496002
Cell size and cell-cycle regulation (1) lig none sp   16496002
PGN-induced dJNK phosphorylation lig Increased P-JNK protein expression with PGN 2.23 15 min PGN induction 19893628
RTK-Ras-ERK pathway regulation (1) lig none -0.91 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) lig none 1.15 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) lig none -0.32 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) lig none -0.88 30 minutes sSpitz stimulation 22028469
Wg pathway regulation (1) lig Decreased WgRluc and not changed sFluc protein expression weak   21886182
Hippo pathway regulation lig none -0.95   23263283

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