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Gene : U2af38 D. melanogaster

DB identifier  ? FBgn0017457 Secondary Identifier  ? CG3582
Name  ? U2 small nuclear riboprotein auxiliary factor 38 Source  FlyBase
  • synonyms:
  • U2AF 38,
  • dU2AF[38],
  • CG3582,
  • DU2AF38,
  • U2AF38,
  • U2AF,
  • FBgn0017457,
  • l(2)06751,
  • FBgn0010626,
  • FBan0003582

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17 Alleles

DB identifier Symbol Allele Class Organism
FBal0064973 U2af38[k14504]   Drosophila melanogaster
FBal0008116 U2af38[06751] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0259632 U2af38[KK108210]   Drosophila melanogaster
FBal0242148 U2af38[JF02444]   Drosophila melanogaster
FBal0058038 U2af38[tRb]   Drosophila melanogaster
FBal0058039 U2af38[+t10]   Drosophila melanogaster
FBal0058040 U2af38[hs.PR]   Drosophila melanogaster
FBal0058041 U2af38[U2af50.PR]   Drosophila melanogaster
FBal0089496 U2af38[DeltaRSGly]   Drosophila melanogaster
FBal0089497 U2af38[DeltaRS]   Drosophila melanogaster
FBal0089498 U2af38[DeltaGly]   Drosophila melanogaster
FBal0100392 U2af38[+tgR10]   Drosophila melanogaster
FBal0058042 U2af38[DeltaE18] loss of function allele Drosophila melanogaster
FBal0212423 U2af38[MtnA.N.T:Avic\GFP]   Drosophila melanogaster
FBal0212424 U2af38[MtnA.C.T:Avic\GFP]   Drosophila melanogaster
FBal0214843 U2af38[GD11019]   Drosophila melanogaster
FBal0273872 U2af38[NIG.3582R]   Drosophila melanogaster

89 Clones

Secondary Identifier DB identifier
bs03g12 FBcl0056571
CK02439 FBcl0060419
EC00742 FBcl0071905
EK304006 FBcl0076102
EK296347 FBcl0078174
EK169020 FBcl0078184
EK157029 FBcl0078192
EK030037 FBcl0078206
GH27423 FBcl0117689
GM19613 FBcl0147994
LD16534 FBcl0156334
LD19514 FBcl0156344
LD13970 FBcl0156350
LD20382 FBcl0156358
LD07472 FBcl0156360
LD03180 FBcl0156367
LD07083 FBcl0156374
LD07455 FBcl0156389
LD08825 FBcl0156392
LD24048 FBcl0170037
LD47442 FBcl0170096
LD34885 FBcl0170099
LD30878 FBcl0170144
RE05569 FBcl0212573
RE71088 FBcl0212881
RE58132 FBcl0212937
RE60670 FBcl0212953
RE18158 FBcl0212961
RE56095 FBcl0213061
RE75196 FBcl0213098

3 Exons

DB identifier Symbol
FBgn0017457:3 U2af38:3
FBgn0017457:2 U2af38:2
FBgn0017457:1 U2af38:1

2 Transcripts

DB identifier Gene
FBtr0078133 U2af38
FBtr0333408 U2af38

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0078133-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333408-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0078133-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333408-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
33201 NCBI Entrez Gene identifiers FBgn0017457
59457 BioGRID FBgn0017457

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2016.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2884.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1466.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 3822.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2361.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2139.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1551.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2156.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2055.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2889.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2493.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1939.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2378.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 3985.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2405.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2104.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2143.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 3410.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3663.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2173.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 3264.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2741.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1712.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2261.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1925.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 5199.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 5937.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3934.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 3375.0
FBgn0017457 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 4278.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0017457:3_FBgn0017457:2 Drosophila melanogaster
intron_FBgn0017457:3_FBgn0017457:1 Drosophila melanogaster

12 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage U2af38 none 1.922883707   19067489
Lipid storage U2af38 none -3.524878877   19067489
ERK signaling U2af38 ERK activation increased weak   17086199
Alternative splicing U2af38 Alternative Dscam (exon 4) splicing sp   15492211
Cell size and cell-cycle regulation (1) U2af38 none sp   16496002
Notch pathway regulation (1) U2af38 Upregulation of Notch pathway np   20493818
RTK-Ras-ERK pathway regulation (1) U2af38 none 0.09 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) U2af38 none -0.7 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) U2af38 none -0.02 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) U2af38 none 0.94 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation U2af38 none 2.26   23263283
Glycosylation regulation (1) U2af38 none sp   21203496

0 Submissions