modENCODE |  Help |  blog

Gene : bowl D. melanogaster

DB identifier  ? FBgn0004893 Secondary Identifier  ? CG10021
Name  ? brother of odd with entrails limited Source  FlyBase
  • synonyms:
  • FBgn0014041,
  • 17-29-5,
  • bowel,
  • l(2)c,
  • FBgn0004893,
  • FBan0010021,
  • org2,
  • CG10021,
  • Su(tor)2-1,
  • FBgn0022034,
  • odd skipped-related 2,
  • Bowl

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

33 Alleles

DB identifier Symbol Allele Class Organism
FBal0278415 bowl[MI05257]   Drosophila melanogaster
FBal0220764 bowl[JF02419]   Drosophila melanogaster
FBal0147263 bowl[RBG]   Drosophila melanogaster
FBal0270295 bowl[NIG.10021R]   Drosophila melanogaster
FBal0121854 bowl[Sutor-85]   Drosophila melanogaster
FBal0042880 bowl[E17] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0095563 bowl[2-17-29-5]   Drosophila melanogaster
FBal0095562 bowl[2-60-20]   Drosophila melanogaster
FBal0051734 bowl[4]   Drosophila melanogaster
FBal0051736 bowl[2] amorphic allele - genetic evidence Drosophila melanogaster
FBal0051733 bowl[5]   Drosophila melanogaster
FBal0034043 bowl[85]   Drosophila melanogaster
FBal0034042 bowl[60]   Drosophila melanogaster
FBal0051735 bowl[3]   Drosophila melanogaster
FBal0034041 bowl[17]   Drosophila melanogaster
FBal0039168 bowl[L26]   Drosophila melanogaster
FBal0051732 bowl[6]   Drosophila melanogaster
FBal0051737 bowl[1] amorphic allele - genetic evidence Drosophila melanogaster
FBal0152087 bowl[unspecified]   Drosophila melanogaster
FBal0051731 bowl[7]   Drosophila melanogaster
FBal0180715 bowl[C268G.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0180714 bowl[C268G.ZFD.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0180713 bowl[R258C.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0180712 bowl[R258C.ZFD.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0155555 bowl[Scer\UAS.cdCIa]   Drosophila melanogaster
FBal0152088 bowl[Scer\UAS.cHa]   Drosophila melanogaster
FBal0180711 bowl[Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0180710 bowl[ZFD.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0263237 bowl[HMS01215]   Drosophila melanogaster
FBal0209172 bowl[GD1389]   Drosophila melanogaster

111 Clones

Secondary Identifier DB identifier
EK146831 FBcl0039384
EK085858 FBcl0039436
EK253806 FBcl0039554
EK248101 FBcl0039678
EK292005 FBcl0039748
EK197359 FBcl0039772
EK196502 FBcl0039786
EK197309 FBcl0040028
EK306353 FBcl0040192
EK305938 FBcl0040220
EK122259 FBcl0040230
EK097261 FBcl0040244
EK134350 FBcl0040256
EK129660 FBcl0040270
EK252925 FBcl0040282
EK057414 FBcl0040296
EK250936 FBcl0040322
EK128657 FBcl0040358
EK057964 FBcl0040374
EK194813 FBcl0040388
EK107452 FBcl0040402
EK113517 FBcl0040418
EP00464 FBcl0088935
EP08605 FBcl0088937
EP08511 FBcl0088957
LD15614 FBcl0161973
LD15736 FBcl0161995
LP03562 FBcl0190601
RE38444 FBcl0232732
RE32407 FBcl0233700

10 Exons

DB identifier Symbol
FBgn0004893:4 bowl:4
FBgn0004893:7 bowl:7
FBgn0004893:9 bowl:9
FBgn0004893:10 bowl:10
FBgn0004893:2 bowl:2
FBgn0004893:6 bowl:6
FBgn0004893:8 bowl:8
FBgn0004893:3 bowl:3
FBgn0004893:1 bowl:1
FBgn0004893:5 bowl:5

7 Transcripts

DB identifier Gene
FBtr0077492 bowl
FBtr0077493 bowl
FBtr0307029 bowl
FBtr0077490 bowl
FBtr0307028 bowl
FBtr0307027 bowl
FBtr0077491 bowl

14 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0077490-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0077491-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0077492-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0077493-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0307027-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0307028-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0307029-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077490-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077491-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077492-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077493-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0307027-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0307028-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0307029-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
33602 NCBI Entrez Gene identifiers FBgn0004893
59806 BioGRID FBgn0004893

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 522.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 371.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 136.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 138.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 174.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 77.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 655.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 422.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 142.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 233.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 185.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 134.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 367.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 718.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 150.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 306.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 804.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 89.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1174.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 110.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 203.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 622.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 150.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 713.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 78.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 148.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 553.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1273.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1400.0
FBgn0004893 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2194.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0004893:6_FBgn0004893:7 Drosophila melanogaster
intron_FBgn0004893:7_FBgn0004893:9 Drosophila melanogaster
intron_FBgn0004893:9_FBgn0004893:10 Drosophila melanogaster
intron_FBgn0004893:8_FBgn0004893:9 Drosophila melanogaster
intron_FBgn0004893:5_FBgn0004893:7 Drosophila melanogaster
intron_FBgn0004893:4_FBgn0004893:7 Drosophila melanogaster
intron_FBgn0004893:2_FBgn0004893:7 Drosophila melanogaster
intron_FBgn0004893:3_FBgn0004893:7 Drosophila melanogaster
intron_FBgn0004893:1_FBgn0004893:7 Drosophila melanogaster

23 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage bowl none 3.665667972   19067489
Lipid storage bowl none 1.046601909   19067489
Cell size and cell-cycle regulation (1) bowl none sp   16496002
Dendrite pattern formation bowl none np   16547170
Muscle morphogenesis and function (1) bowl none np   20220848
Muscle morphogenesis and function (1) bowl none np   20220848
Muscle morphogenesis and function (1) bowl none np   20220848
Heat nociception (1) bowl none -0.84   21074052
Heat nociception (1) bowl Developmentally lethal -1.17   21074052
Heart development and function (1) bowl none 1   20371351
Heart development and function (1) bowl none 1   20371351
Serratia marcescens infection (1) bowl none 0.753086419753086   19520911
Notch pathway regulation (4) bowl Gain of bristles, planar polarity defects, notum malformation migration, lateral inhibition sp   19363474
Notch pathway regulation (4) bowl Gain of bristles, planar polarity defects sp   19363474
Notch pathway regulation (4) bowl Planar polarity defects, notum malformation migration sp   19363474
Notch pathway regulation (5) bowl none np   19363474
Adiposity regulation (1) bowl none -0.049   20074523
RTK-Ras-ERK pathway regulation (1) bowl none 0.11 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) bowl Decreased ERK phosphorylation after EGF stimulation -1.88 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) bowl none 0.19 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) bowl none 0.75 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation bowl none 0.98   23263283
Glycosylation regulation (1) bowl none sp   21203496

0 Submissions