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Gene : pdm2 D. melanogaster

DB identifier  ? FBgn0004394 Secondary Identifier  ? CG12287
Name  ? POU domain protein 2 Source  FlyBase
  • synonyms:
  • Pdm,
  • Oct2,
  • FBgn0004394,
  • dPOU28/pdm-2,
  • dPOU-28,
  • dPOU28,
  • miti,
  • dim,
  • Miti-mere,
  • CG15487,
  • CG12287,
  • POU domain protein 2,
  • dOct2,
  • FBgn0032441,
  • Pdm2,
  • FBan0012287,
  • Pdm-2,
  • Oct-2,
  • FBgn0032443,
  • didymous,
  • CG15486,
  • POU domain prot 2

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21 Alleles

DB identifier Symbol Allele Class Organism
FBal0267295 pdm2[MI05029]   Drosophila melanogaster
FBal0192139 pdm2[MB00894]   Drosophila melanogaster
FBal0178469 pdm2[f05144]   Drosophila melanogaster
FBal0242139 pdm2[JF02405]   Drosophila melanogaster
FBal0158824 pdm2[d09994]   Drosophila melanogaster
FBal0046251 pdm2[PR13]   Drosophila melanogaster
FBal0046247 pdm2[1602]   Drosophila melanogaster
FBal0046248 pdm2[971]   Drosophila melanogaster
FBal0034399 pdm2[hs.P]   Drosophila melanogaster
FBal0039736 pdm2[Deltamiti.Hsp83] antimorphic allele - genetic evidence Drosophila melanogaster
FBal0039737 pdm2[Deltamiti.hs]   Drosophila melanogaster
FBal0056334 pdm2[hs.PC]   Drosophila melanogaster
FBal0046250 pdm2[E46] antimorphic allele - genetic evidence Drosophila melanogaster
FBal0046249 pdm2[E45]   Drosophila melanogaster
FBal0264461 pdm2[MI03610]   Drosophila melanogaster
FBal0210312 pdm2[GD5046]   Drosophila melanogaster
FBal0210313 pdm2[GD16857]   Drosophila melanogaster
FBal0212606 pdm2[Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0222688 pdm2[f02059]   Drosophila melanogaster
FBal0237071 pdm2[KK110854]   Drosophila melanogaster
FBal0258268 pdm2[MI02425]   Drosophila melanogaster

17 Clones

Secondary Identifier DB identifier
281228 FBcl0404752
CK01.121A.H8 FBcl0404819
CK00427 FBcl0060603
EC15179 FBcl0073125
EK092664 FBcl0083396
EK306154 FBcl0083908
EK220352 FBcl0083940
EP14112 FBcl0089317
RE49429 FBcl0204880
RE34565 FBcl0204881
RE51329 FBcl0204884
124791 FBcl0404764
97627 FBcl0404766
97906 FBcl0404772
RP001025900 FBcl0603915
MIP04269 FBcl0702732
FI17318 FBcl0742760

8 Exons

DB identifier Symbol
FBgn0004394:3 pdm2:3
FBgn0004394:4 pdm2:4
FBgn0004394:5 pdm2:5
FBgn0004394:7 pdm2:7
FBgn0004394:8 pdm2:8
FBgn0004394:6 pdm2:6
FBgn0004394:2 pdm2:2
FBgn0004394:1 pdm2:1

4 Transcripts

DB identifier Gene
FBtr0080392 pdm2
FBtr0340540 pdm2
FBtr0340539 pdm2
FBtr0080393 pdm2

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080392-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080393-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340539-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340540-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080392-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080393-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340539-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340540-3-prime-utr Drosophila melanogaster

Interactions

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Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34673 NCBI Entrez Gene identifiers FBgn0004394
60717 BioGRID FBgn0004394

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 135.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 105.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 110.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 238.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 87.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 113.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 63.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 67.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 258.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 120.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 102.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 108.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 75.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 64.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 66.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 65.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 80.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 26.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 45.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 181.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 140.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 111.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 82.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 127.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 205.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 73.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 694.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2342.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1426.0
FBgn0004394 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 744.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0004394:3_FBgn0004394:4 Drosophila melanogaster
intron_FBgn0004394:4_FBgn0004394:5 Drosophila melanogaster
intron_FBgn0004394:5_FBgn0004394:7 Drosophila melanogaster
intron_FBgn0004394:7_FBgn0004394:8 Drosophila melanogaster
intron_FBgn0004394:6_FBgn0004394:7 Drosophila melanogaster
intron_FBgn0004394:2_FBgn0004394:4 Drosophila melanogaster
intron_FBgn0004394:1_FBgn0004394:4 Drosophila melanogaster

27 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage pdm2 none 1.861342956   19067489
Lipid storage pdm2 none 2.579752936   19067489
Lipid storage pdm2 none 0.587497074   19067489
Lipid storage pdm2 none 4.545107812   19067489
Lipid storage pdm2 none -0.801668211   19067489
Lipid storage pdm2 none 1.748531781   19067489
Neural outgrowth pdm2 Cell cluster defect np   18604272
Cell size and cell-cycle regulation (1) pdm2 none sp   16496002
Cell size and cell-cycle regulation (1) pdm2 none sp   16496002
Dendrite pattern formation pdm2 none np   16547170
Muscle morphogenesis and function (1) pdm2 none np   20220848
Heat nociception (1) pdm2 none -1.17   21074052
Heart development and function (1) pdm2 none 1   20371351
Serratia marcescens infection (1) pdm2 none -0.422535211267605   19520911
Notch pathway regulation (4) pdm2 none 0   19363474
Notch induced transcription pdm2 none 1.0317 without Notch stimulation 20959007
Notch induced transcription pdm2 none 2.844 without Notch stimulation 20959007
Notch induced transcription pdm2 Upregulation of Notch pathway after Notch stimulation 2.1767 N(delta)ecn Notch stimulation 20959007
Notch induced transcription pdm2 Upregulation of Notch pathway after Notch stimulation 4.5877 N(delta)ecn Notch stimulation 20959007
Notch induced transcription pdm2 none 0.072844 N(delta)ecn Notch stimulation 20959007
Notch induced transcription pdm2 none 0.4665 N(delta)ecn Notch stimulation 20959007
Adiposity regulation (1) pdm2 none -0.222   20074523
RTK-Ras-ERK pathway regulation (1) pdm2 Decreased ERK phosphorylation after EGF stimulation -1.7 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) pdm2 none 1.47 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) pdm2 none 1.36 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) pdm2 Increased ERK phosphorylation after sSpitz and EGF stimulation 2.17 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation pdm2 none 1.43   23263283

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