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Gene : betaTub97EF D. melanogaster

DB identifier  ? FBgn0003890 Secondary Identifier  ? CG4869
Name  ? beta-Tubulin at 97EF Source  FlyBase
  • synonyms:
  • betaTub4,
  • FBgn0039567,
  • betaTub97EF,
  • beta-Tubulin at 97EF,
  • Tub,
  • betaTub98BC,
  • tubulin,
  • Beta4-tubulin,
  • 4t,
  • beta97F,
  • BETA 98B,
  • Beta tubulin,
  • beta-Tub97EF,
  • beta4 tubulin,
  • beta4,
  • DTB1,
  • FBan0004869,
  • Dmbeta4,
  • betatubulin,
  • FBgn0003890,
  • beta-Tub,
  • T,
  • beta-Tubulin,
  • betaTub98C,
  • beta4t,
  • CG4869,
  • B4t

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7 Alleles

DB identifier Symbol Allele Class Organism
FBal0286448 betaTub97EF[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286449 betaTub97EF[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0198400 betaTub97EF[MB03812]   Drosophila melanogaster
FBal0162870 betaTub97EF[e01802]   Drosophila melanogaster
FBal0277583 betaTub97EF[MI06334]   Drosophila melanogaster
FBal0238734 betaTub97EF[KK113357]   Drosophila melanogaster
FBal0274410 betaTub97EF[NIG.4869R]   Drosophila melanogaster

243 Clones

Secondary Identifier DB identifier
ESG0112d.B21_C08 FBcl0001637
EK306521 FBcl0009374
GH11468 FBcl0116395
GH11977 FBcl0116401
GH22862 FBcl0116469
GH20305 FBcl0116575
GH18092 FBcl0116577
GM04863 FBcl0137927
GM12738 FBcl0144153
GM12673 FBcl0144154
LP10436 FBcl0184441
LP09169 FBcl0184515
RH41340 FBcl0254214
SD04496 FBcl0276592
EC053050 FBcl0299308
IP13202 FBcl0319361
Dmel_dig_006267_0630_2581 FBcl0371068
Dmel_dig_009889_0637_2539 FBcl0371069
CK01.63C.F12 FBcl0466544
533822 FBcl0466539
RP003442300 FBcl0570267
RP003289933 FBcl0570227
RP003454286 FBcl0570215
RP003116105 FBcl0570216
RP003133668 FBcl0570217
RP003315027 FBcl0570218
RP003397767 FBcl0570219
RP003463476 FBcl0570220
RP003068921 FBcl0570221
RP003309192 FBcl0570222

8 Exons

DB identifier Symbol
FBgn0003890:8 betaTub97EF:8
FBgn0003890:7 betaTub97EF:7
FBgn0003890:6 betaTub97EF:6
FBgn0003890:5 betaTub97EF:5
FBgn0003890:3 betaTub97EF:3
FBgn0003890:2 betaTub97EF:2
FBgn0003890:1 betaTub97EF:1
FBgn0003890:4 betaTub97EF:4

2 Transcripts

DB identifier Gene
FBtr0334906 betaTub97EF
FBtr0300611 betaTub97EF

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0300611-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334906-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300611-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334906-3-prime-utr Drosophila melanogaster

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3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43359 NCBI Entrez Gene identifiers FBgn0003890
43358 NCBI Entrez Gene identifiers FBgn0003890
68240 BioGRID FBgn0003890

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 4174.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 4427.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 4059.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 5299.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 4702.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 3339.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1878.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2464.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1054.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2595.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2305.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1537.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2463.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1883.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2160.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2051.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1681.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2771.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3331.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 3615.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2528.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2369.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2159.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2131.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2607.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1874.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 3485.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3113.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2826.0
FBgn0003890 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1846.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0003890:8_FBgn0003890:7 Drosophila melanogaster
intron_FBgn0003890:7_FBgn0003890:6 Drosophila melanogaster
intron_FBgn0003890:6_FBgn0003890:5 Drosophila melanogaster
intron_FBgn0003890:5_FBgn0003890:3 Drosophila melanogaster
intron_FBgn0003890:3_FBgn0003890:2 Drosophila melanogaster
intron_FBgn0003890:2_FBgn0003890:1 Drosophila melanogaster
intron_FBgn0003890:6_FBgn0003890:4 Drosophila melanogaster
intron_FBgn0003890:4_FBgn0003890:3 Drosophila melanogaster

25 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Cell size regulation betaTub97EF none -4.07   19216764
Lipid storage betaTub97EF none 0.204771616   19067489
Lipid storage betaTub97EF none 0.668037111   19067489
Lipid storage betaTub97EF none -0.27091233   19067489
Lipid storage betaTub97EF none 0.717879439   19067489
Lipid storage betaTub97EF none -0.047413017   19067489
Lipid storage betaTub97EF none -0.791987953   19067489
Mitochondrial morphology betaTub97EF Clumped Mitochondria, Cell death np   18353969
Constitutive protein secretion and Golgi organization (1) betaTub97EF Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) betaTub97EF Decreased viability sp   16496002
Cell size and cell-cycle regulation (2) betaTub97EF none 1.08   16496002
Cell size and cell-cycle regulation (3) betaTub97EF Decreased cell number 386   16496002
Cell size and cell-cycle regulation (4) betaTub97EF none below threshold   16496002
Mitochondrial biogenesis and function betaTub97EF Increased mitochondrial citrate synthase activity 1.757   18042644
Mitochondrial biogenesis and function betaTub97EF Increased mitochondrial citrate synthase activity 1.349   18042644
RTK-Ras-ERK pathway regulation (1) betaTub97EF Increased ERK phosphorylation after EGF stimulation 3.76 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) betaTub97EF none -0.32 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) betaTub97EF none -0.49 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) betaTub97EF none 0.31 10 minutes sSpitz stimulation 22028469
Wnt proteins secretion betaTub97EF none -0.4   22094269
Hippo pathway regulation betaTub97EF none -0.82   23263283
Muscle development and maintenance betaTub97EF Pupal lethal sp  
Muscle maintenance betaTub97EF Climbing defect sp  
Glycosylation regulation (1) betaTub97EF Decreased (GlcNAc)n Chp glycosylation sp   21203496
Glycosylation regulation (2) betaTub97EF none np   21203496

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