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Gene : pum D. melanogaster

DB identifier  ? FBgn0003165 Secondary Identifier  ? CG9755
Name  ? pumilio Source  FlyBase
  • synonyms:
  • pumuckel,
  • FBgn0046414,
  • FBgn0003165,
  • fs(3)02003,
  • bemused,
  • pkl,
  • ovt,
  • FBgn0004871,
  • FBgn0015529,
  • l(3)01688,
  • milord,
  • FBgn0010759,
  • ova,
  • CG9763,
  • Pumilio,
  • FBgn0014132,
  • anon-WO0172774.19,
  • ovarette,
  • FBan0009755,
  • bem,
  • Pumillio,
  • EP(3)0883,
  • CG9755,
  • PUM

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145 Alleles

DB identifier Symbol Allele Class Organism
FBal0260426 pum[MI01395]   Drosophila melanogaster
FBal0260436 pum[MI02433]   Drosophila melanogaster
FBal0220657 pum[JF02267]   Drosophila melanogaster
FBal0267484 pum[MI04830]   Drosophila melanogaster
FBal0211804 pum[CC00479]   Drosophila melanogaster
FBal0283471 pum[MI07654]   Drosophila melanogaster
FBal0178336 pum[DG16508]   Drosophila melanogaster
FBal0178337 pum[DG05207]   Drosophila melanogaster
FBal0154722 pum[EY03021]   Drosophila melanogaster
FBal0178321 pum[d05225]   Drosophila melanogaster
FBal0178311 pum[f03159]   Drosophila melanogaster
FBal0178324 pum[c07126]   Drosophila melanogaster
FBal0178325 pum[c06923]   Drosophila melanogaster
FBal0178329 pum[c04301]   Drosophila melanogaster
FBal0146875 pum[milord-2]   Drosophila melanogaster
FBal0146876 pum[milord-1]   Drosophila melanogaster
FBal0178331 pum[c03585]   Drosophila melanogaster
FBal0178334 pum[c01405]   Drosophila melanogaster
FBal0158758 pum[PL00610]   Drosophila melanogaster
FBal0158759 pum[EY11048]   Drosophila melanogaster
FBal0178319 pum[d09872]   Drosophila melanogaster
FBal0178320 pum[d05643]   Drosophila melanogaster
FBal0178322 pum[d04225]   Drosophila melanogaster
FBal0178323 pum[d03766]   Drosophila melanogaster
FBal0178312 pum[f01560]   Drosophila melanogaster
FBal0178313 pum[f00766]   Drosophila melanogaster
FBal0178314 pum[e03386]   Drosophila melanogaster
FBal0178315 pum[e01967]   Drosophila melanogaster
FBal0178316 pum[e01497]   Drosophila melanogaster
FBal0178317 pum[e01103]   Drosophila melanogaster

71 Clones

Secondary Identifier DB identifier
EK166602 FBcl0029106
ESG0110b.E21_H10 FBcl0003691
EK195627 FBcl0030796
EK035032 FBcl0030872
EK233016 FBcl0030892
EK100317 FBcl0030908
EK199601 FBcl0030928
EK308936 FBcl0030948
EK093429 FBcl0030968
EK195406 FBcl0030988
EK175811 FBcl0031006
EK196528 FBcl0031180
EK010834 FBcl0031238
EK294509 FBcl0031356
EK217437 FBcl0031396
EK182216 FBcl0031566
EK133508 FBcl0031662
EK048325 FBcl0031728
EK056101 FBcl0031846
EK216338 FBcl0031942
EK195252 FBcl0031982
EK146030 FBcl0032228
EK255709 FBcl0032246
EK194354 FBcl0032382
EK172604 FBcl0032420
EK308305 FBcl0032500
EK136417 FBcl0032632
EK044059 FBcl0032668
EP10720 FBcl0089343
EP15104 FBcl0089351

21 Exons

DB identifier Symbol
FBgn0003165:13 pum:13
FBgn0003165:12 pum:12
FBgn0003165:11 pum:11
FBgn0003165:7 pum:7
FBgn0003165:6 pum:6
FBgn0003165:5 pum:5
FBgn0003165:4 pum:4
FBgn0003165:3 pum:3
FBgn0003165:21 pum:21
FBgn0003165:19 pum:19
FBgn0003165:9 pum:9
FBgn0003165:1 pum:1
FBgn0003165:16 pum:16
FBgn0003165:2 pum:2
FBgn0003165:20 pum:20
FBgn0003165:18 pum:18
FBgn0003165:17 pum:17
FBgn0003165:15 pum:15
FBgn0003165:14 pum:14
FBgn0003165:10 pum:10
FBgn0003165:8 pum:8

8 Transcripts

DB identifier Gene
FBtr0333667 pum
FBtr0081993 pum
FBtr0081992 pum
FBtr0081991 pum
FBtr0081990 pum
FBtr0081994 pum
FBtr0333668 pum
FBtr0305197 pum

16 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0081990-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0081991-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0081992-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0081993-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0081994-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0305197-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333667-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333668-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081990-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081991-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081992-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081993-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081994-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0305197-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333667-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333668-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
41094 NCBI Entrez Gene identifiers FBgn0003165
66261 BioGRID FBgn0003165

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1428.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2336.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 3241.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1526.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1380.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 706.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1388.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1820.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 922.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2386.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2015.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1176.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3549.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1493.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 5006.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2686.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 5338.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 3621.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2216.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 3401.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 3261.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2193.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2199.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 3794.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2015.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 5942.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 4326.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2528.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2373.0
FBgn0003165 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1876.0

22 Introns

DB identifier
Organism . Name
intron_FBgn0003165:21_FBgn0003165:18 Drosophila melanogaster
intron_FBgn0003165:18_FBgn0003165:17 Drosophila melanogaster
intron_FBgn0003165:17_FBgn0003165:15 Drosophila melanogaster
intron_FBgn0003165:15_FBgn0003165:14 Drosophila melanogaster
intron_FBgn0003165:14_FBgn0003165:13 Drosophila melanogaster
intron_FBgn0003165:13_FBgn0003165:12 Drosophila melanogaster
intron_FBgn0003165:12_FBgn0003165:11 Drosophila melanogaster
intron_FBgn0003165:11_FBgn0003165:7 Drosophila melanogaster
intron_FBgn0003165:7_FBgn0003165:6 Drosophila melanogaster
intron_FBgn0003165:6_FBgn0003165:5 Drosophila melanogaster
intron_FBgn0003165:5_FBgn0003165:4 Drosophila melanogaster
intron_FBgn0003165:4_FBgn0003165:3 Drosophila melanogaster
intron_FBgn0003165:19_FBgn0003165:18 Drosophila melanogaster
intron_FBgn0003165:16_FBgn0003165:15 Drosophila melanogaster
intron_FBgn0003165:4_FBgn0003165:2 Drosophila melanogaster
intron_FBgn0003165:20_FBgn0003165:18 Drosophila melanogaster
intron_FBgn0003165:4_FBgn0003165:1 Drosophila melanogaster
intron_FBgn0003165:10_FBgn0003165:7 Drosophila melanogaster
intron_FBgn0003165:10_FBgn0003165:8 Drosophila melanogaster
intron_FBgn0003165:8_FBgn0003165:7 Drosophila melanogaster
intron_FBgn0003165:10_FBgn0003165:9 Drosophila melanogaster
intron_FBgn0003165:9_FBgn0003165:7 Drosophila melanogaster

25 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage pum none 1.045283304   19067489
Lipid storage pum none 0.100244847   19067489
Lipid storage pum none 0.756783063   19067489
Lipid storage pum none 1.353037879   19067489
Lipid storage pum none -0.256600851   19067489
Lipid storage pum none -0.794743522   19067489
Lipid storage pum none 0.875859044   19067489
Lipid storage pum none -0.215167048   19067489
Lipid storage pum none 0.975390524   19067489
Lipid storage pum none 1.239537519   19067489
Lipid storage pum none 0.946659464   19067489
Lipid storage pum none 0.923352226   19067489
Neural outgrowth pum Defasciculation, Short axons np   18604272
ERK signaling pum ERK activation increased weak   17086199
Cell size and cell-cycle regulation (1) pum none sp   16496002
Combinatorial effect with methyl methanesulphonate (2) pum none sp   19543366
Heart development and function (1) pum none 1   20371351
S2 cell spreading pum none np   21041442
Secretory pathway regulation pum Decreased BiP signal peptide and firefly luciferase fusion protein expression (-2) - (-1.5)   19942856
RTK-Ras-ERK pathway regulation (1) pum none 0.1 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) pum none -0.99 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) pum none -0.65 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) pum none -0.85 30 minutes sSpitz stimulation 22028469
Wg pathway regulation (1) pum Decreased WgRluc and not changed sFluc protein expression weak   21886182
Hippo pathway regulation pum none -0.05   23263283

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