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Gene : car D. melanogaster

DB identifier  ? FBgn0000257 Secondary Identifier  ? CG12230
Name  ? carnation Source  FlyBase
  • synonyms:
  • Vacuolar protein sorting protein 33,
  • Vps33/carnation,
  • FBgn0040160,
  • FBan0012230,
  • Carnation,
  • carn,
  • l(1)G0447,
  • FBgn0000257,
  • Car,
  • VPS33a,
  • Vps33,
  • Dm-Vps33,
  • FBgn0027357,
  • Vps33p,
  • CG12230

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18 Alleles

DB identifier Symbol Allele Class Organism
FBal0257641 car[HMS00972]   Drosophila melanogaster
FBal0159420 car[EY09656]   Drosophila melanogaster
FBal0240577 car[+t4.4]   Drosophila melanogaster
FBal0259759 car[KK108988]   Drosophila melanogaster
FBal0103731 car[G0447]   Drosophila melanogaster
FBal0240578 car[Delta141]   Drosophila melanogaster
FBal0240579 car[Delta163]   Drosophila melanogaster
FBal0240580 car[Delta33]   Drosophila melanogaster
FBal0240581 car[Scer\UAS.cAa]   Drosophila melanogaster
FBal0001541 car[1]   Drosophila melanogaster
FBal0102797 car[GMR.PS]   Drosophila melanogaster
FBal0001542 car[2]   Drosophila melanogaster
FBal0001543 car[26-48]   Drosophila melanogaster
FBal0051717 car[unspecified]   Drosophila melanogaster
FBal0194558 car[Delta146] loss of function allele Drosophila melanogaster
FBal0209225 car[GD1397]   Drosophila melanogaster
FBal0271177 car[NIG.12230R]   Drosophila melanogaster
FBal0247338 car[dsRNA.Scer\UAS]   Drosophila melanogaster

72 Clones

Secondary Identifier DB identifier
AT29179 FBcl0018265
AT27510 FBcl0018271
EP21750 FBcl0082917
EN05938 FBcl0093981
EN04753 FBcl0094193
EN09909 FBcl0097127
EK290304 FBcl0108488
GH20069 FBcl0111097
EK070843 FBcl0113874
EK176856 FBcl0117270
EK246504 FBcl0117438
EK129323 FBcl0122712
LD08438 FBcl0153961
LD40135 FBcl0163427
LD23088 FBcl0167105
LD22396 FBcl0167106
LD38724 FBcl0167146
LP01613 FBcl0182614
RE32658 FBcl0203898
RE31274 FBcl0203899
RE66786 FBcl0203907
524104 FBcl0467178
CK01.42A.A6 FBcl0467124
CK01.90A.C6 FBcl0467142
524794 FBcl0467165
RP004037229 FBcl0513739
RP004117936 FBcl0513740
RP004491377 FBcl0513741
RP004435033 FBcl0513742
RP004054247 FBcl0513743

4 Exons

DB identifier Symbol
FBgn0000257:1 car:1
FBgn0000257:3 car:3
FBgn0000257:4 car:4
FBgn0000257:2 car:2

3 Transcripts

DB identifier Gene
FBtr0074727 car
FBtr0331158 car
FBtr0074728 car

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0074727-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074728-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331158-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074727-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074728-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331158-3-prime-utr Drosophila melanogaster

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0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
32947 NCBI Entrez Gene identifiers FBgn0000257
59247 BioGRID FBgn0000257

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 358.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 266.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 185.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 313.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 365.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 341.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 607.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 439.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 116.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 280.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 403.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 183.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 306.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 271.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 350.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 408.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 392.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 304.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 358.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 310.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 533.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 358.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 463.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 336.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 202.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 765.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 440.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 410.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 315.0
FBgn0000257 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 324.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0000257:1_FBgn0000257:3 Drosophila melanogaster
intron_FBgn0000257:3_FBgn0000257:4 Drosophila melanogaster
intron_FBgn0000257:2_FBgn0000257:4 Drosophila melanogaster

19 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage car none 0.443409027   19067489
Lipid storage car none 0.539658729   19067489
L. monocytogenes infection car Escape pff LLO- strain ***   16157870
Cell size and cell-cycle regulation (1) car none sp   16496002
C. trachomatis infection car C. trachomatis infection down np   18369471
Muscle morphogenesis and function (1) car Lethal np   20220848
Muscle morphogenesis and function (1) car none np   20220848
Heat nociception (1) car none -1.17   21074052
Heat nociception (1) car none 0.02   21074052
Heart development and function (1) car none 1   20371351
Serratia marcescens infection (1) car none 1.47272727272727   19520911
Notch pathway regulation (4) car Notum malformation death 9   19363474
Notch pathway regulation (4) car Notum malformation death 8   19363474
Notch pathway regulation (3) car Upregulation of Notch pathway np   20493818
Notch pathway regulation (4) car Upregulation of Notch pathway; wing disc size: overgrown; wing disc NRE:EGFP: up; wing disc myrRFP: accumulation, reduced sp en-GAL4 20493818
Adiposity regulation (1) car none -0.51   20074523
Wnt proteins secretion car none -0.8   22094269
Hippo pathway regulation car none 0.83   23263283
Glycosylation regulation (1) car none sp   21203496

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