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Transcriptional profiling of C. elegans Embryonic Development using RNA-seq

experiment: Transcriptional profiling of C. elegans Embryonic Development using RNA-seq project: The C. elegans Transcriptome PI: Robert Waterston Labs: Robert Waterston
Using massively parallel sequencing by synthesis methods, we are surveying transcripts from 30 minute intervals of embryonic development of the nematode C. elegans. We use novel statistical approaches to evaluate coverage of annotated features of the genome and of candidate processed transcripts.

NO FEATURES GENERATED BY THIS EXPERIMENT All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All 24 tracks I II III IV V X
All entries in public repositories generated by this experiment
There are 25 RNA-seq submissions for this experiment:
DCC id Name developmental stage strain temperature Embargoed until Features, GBrowse and Data Files
modENCODE_6561

Celegans Emb Timecourse Expression N2 EE 50-0 RNA-seq sequences and alignment N2 EE 50-0 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6561.sorted
SRA: SRR332921
SRA: SRR332922
SRA: SRR350954
SRA: SRR350955
SRA: SRR359063
...All entries in public repositories generated by this submission



4 files Download data files
modENCODE_6580

Celegans Emb Timecourse Expression N2 EE 50-600 RNA-seq sequences and alignment N2 EE 50-600 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6580.sorted
SRA: SRR350990
SRA: SRR350991
SRA: SRR350992
SRA: SRR350993
SRA: SRR359088


4 files Download data files
modENCODE_6578

Celegans Emb Timecourse Expression N2 EE 50-570 RNA-seq sequences and alignment N2 EE 50-570 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6578.sorted
SRA: SRR350987
SRA: SRR350988
SRA: SRR350989
SRA: SRR359089


4 files Download data files
modENCODE_6579

Celegans Emb Timecourse Expression N2 EE 50-60 RNA-seq sequences and alignment N2 EE 50-60 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired SRA: SRR316196
SRA: SRR317083


4 files Download data files
modENCODE_6577

Celegans Emb Timecourse Expression N2 EE 50-540 RNA-seq sequences and alignment N2 EE 50-540 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6577.sorted
SRA: SRR351017
SRA: SRR351018
SRA: SRR351019
SRA: SRR351020
SRA: SRR359087


4 files Download data files
modENCODE_6564

Celegans Emb Timecourse Expression N2 EE 50-180 RNA-seq sequences and alignment N2 EE 50-180 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6564.sorted
SRA: SRR351009


4 files Download data files
modENCODE_6562

Celegans Emb Timecourse Expression N2 EE 50-120 RNA-seq sequences and alignment N2 EE 50-120 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6562.sorted
SRA: SRR316753
SRA: SRR317082
SRA: SRR350977


4 files Download data files
modENCODE_6576

Celegans Emb Timecourse Expression N2 EE 50-510 RNA-seq sequences and alignment N2 EE 50-510 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6576.sorted
SRA: SRR351036
SRA: SRR351037
SRA: SRR351038
SRA: SRR351039
SRA: SRR359091


4 files Download data files
modENCODE_6563

Celegans Emb Timecourse Expression N2 EE 50-150 RNA-seq sequences and alignment N2 EE 50-150 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6563.sorted
SRA: SRR351023
SRA: SRR351024


4 files Download data files
modENCODE_6566

Celegans Emb Timecourse Expression N2 EE 50-240 RNA-seq sequences and alignment N2 EE 50-240 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6566.sorted
SRA: SRR351010
SRA: SRR351011
SRA: SRR351012
SRA: SRR359069


4 files Download data files
modENCODE_6574

Celegans Emb Timecourse Expression N2 EE 50-450 RNA-seq sequences and alignment N2 EE 50-450 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6574.sorted
SRA: SRR351034
SRA: SRR351035


4 files Download data files
modENCODE_6567

Celegans Emb Timecourse Expression N2 EE 50-270 RNA-seq sequences and alignment N2 EE 50-270 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6567.sorted
SRA: SRR351030
SRA: SRR351031
SRA: SRR351032
SRA: SRR351033
SRA: SRR359094


4 files Download data files
modENCODE_6575

Celegans Emb Timecourse Expression N2 EE 50-480 RNA-seq sequences and alignment N2 EE 50-480 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6575.sorted
SRA: SRR351013
SRA: SRR351014
SRA: SRR351015
SRA: SRR351016
SRA: SRR359090


4 files Download data files
modENCODE_6573

Celegans Emb Timecourse Expression N2 EE 50-420 RNA-seq sequences and alignment N2 EE 50-420 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6573.sorted
SRA: SRR351007
SRA: SRR351008


4 files Download data files
modENCODE_6565

Celegans Emb Timecourse Expression N2 EE 50-210 RNA-seq sequences and alignment N2 EE 50-210 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6565.sorted
SRA: SRR351025
SRA: SRR351026
SRA: SRR351027
SRA: SRR351028
SRA: SRR351029
...All entries in public repositories generated by this submission



4 files Download data files
modENCODE_6569

Celegans Emb Timecourse Expression N2 EE 50-300 RNA-seq sequences and alignment N2 EE 50-300 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6569.sorted
SRA: SRR352279
SRA: SRR352280


4 files Download data files
modENCODE_6572

Celegans Emb Timecourse Expression N2 EE 50-390 RNA-seq sequences and alignment N2 EE 50-390 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6572.sorted
SRA: SRR351004
SRA: SRR351005
SRA: SRR351006
SRA: SRR478540


4 files Download data files
modENCODE_6570

Celegans Emb Timecourse Expression N2 EE 50-330 RNA-seq sequences and alignment N2 EE 50-330 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6570.sorted
SRA: SRR351000
SRA: SRR351001


4 files Download data files
modENCODE_6571

Celegans Emb Timecourse Expression N2 EE 50-360 RNA-seq sequences and alignment N2 EE 50-360 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6571.sorted
SRA: SRR351002
SRA: SRR351003


4 files Download data files
modENCODE_6568

Celegans Emb Timecourse Expression N2 EE 50-30 RNA-seq sequences and alignment N2 EE 50-30 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6568.sorted
SRA: SRR332923
SRA: SRR332924
SRA: SRR350956
SRA: SRR350957
SRA: SRR359065


4 files Download data files
modENCODE_6585

Celegans Emb Timecourse Expression N2 EE 50-90 RNA-seq sequences and alignment N2 EE 50-90 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6585.sorted
SRA: SRR332925
SRA: SRR332926
SRA: SRR332927
SRA: SRR350958
SRA: SRR359066


4 files Download data files
modENCODE_6584

Celegans Emb Timecourse Expression N2 EE 50-720 RNA-seq sequences and alignment N2 EE 50-720 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6584.sorted
SRA: SRR351040
SRA: SRR351041


4 files Download data files
modENCODE_6583

Celegans Emb Timecourse Expression N2 EE 50-690 RNA-seq sequences and alignment N2 EE 50-690 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6583.sorted
SRA: SRR351021
SRA: SRR351022


4 files Download data files
modENCODE_6582

Celegans Emb Timecourse Expression N2 EE 50-660 RNA-seq sequences and alignment N2 EE 50-660 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6582.sorted
SRA: SRR350996
SRA: SRR350997
SRA: SRR350998


4 files Download data files
modENCODE_6581

Celegans Emb Timecourse Expression N2 EE 50-630 RNA-seq sequences and alignment N2 EE 50-630 [ALL]
N2 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: submission_6581.sorted
SRA: SRR350994
SRA: SRR350995
SRA: SRR350996


4 files Download data files