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RNA-seq support of the ChIP data

experiment: RNA-seq support of the ChIP data project: Regulatory Elements in Drosophila PI: Kevin White Labs: Kevin White
RNA-seq was performed on polyA-RNA for developmental stages of Drosophila melanogaster on which ChIP-chip or ChIP-seq has been performed. The RNA was isolated from the same material used for ChIP experiments and, after purification and production of the Solexa libraries, sequenced (single-end) at Argonne National Lab. For RNA-seq, 2 lanes per sample are bieng run.

NO FEATURES GENERATED BY THIS EXPERIMENT All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 12 RNA-seq submissions for this experiment:
DCC id Name developmental stage strain Embargoed until Features, GBrowse and Data Files
modENCODE_2019

E4-8 TotalRNA RNAseq Embryo 4-8 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E04-8_accepted_hits.sam.bam.sorted
GEO: GSM451809


1 files Download data files
modENCODE_2023

E20-24 TotalRNA RNAseq Embryo 20-24 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E20-24_accepted_hits.sam.bam.sorted
GEO: GSM451810


1 files Download data files
modENCODE_2027

AdultMale TotalRNA RNAseq Adult Male [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: YAdultMale_accepted_hits.sam.bam.sorted
GEO: GSM451804


1 files Download data files
modENCODE_2020

E8-12 TotalRNA RNAseq Embryo 8-12 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E08-12_accepted_hits.sam.bam.sorted
GEO: GSM451808


1 files Download data files
modENCODE_2024

L1 TotalRNA RNAseq L1 stage larvae [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: L1_accepted_hits.sam.bam.sorted
GEO: GSM451811


1 files Download data files
modENCODE_2029

L3 TotalRNA RNAseq L3 stage larvae [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: L3_accepted_hits.sam.bam.sorted
GEO: GSM451812


1 files Download data files
modENCODE_2021

E12-16 TotalRNA RNAseq Embryo 12-16 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E12-16_accepted_hits.sam.bam.sorted
GEO: GSM451803


1 files Download data files
modENCODE_2010

E0-4 TotalRNA RNAseq Embryo 0-4 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E0-4_accepted_hits.sam.bam.sorted
GEO: GSM451806


1 files Download data files
modENCODE_2030

Pupae TotalRNA RNAseq Pupae [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: Pupae_accepted_hits.sam.bam.sorted
GEO: GSM451813


1 files Download data files
modENCODE_2025

L2 TotalRNA RNAseq L2 stage larvae [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: L2_accepted_hits.sam.bam.sorted
GEO: GSM453867


1 files Download data files
modENCODE_2022

E16-20 TotalRNA RNAseq Embryo 16-20 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: E16-20_accepted_hits.sam.bam.sorted
GEO: GSM451807


1 files Download data files
modENCODE_2026

AdultFemale TotalRNA RNAseq Adult Female [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: YAdultFemale_accepted_hits.sam.bam.sorted
GEO: GSM451805


1 files Download data files