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Genomic Distributions of non-Histone Chromosomal Proteins in D. melanogaster by ChIP-seq

experiment: Genomic Distributions of non-Histone Chromosomal Proteins in D. melanogaster by ChIP-seq project: Chromosomal Proteins PI: Gary Karpen Labs: Gary Karpen, Mitzi Kuroda, Sarah Elgin
We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using the Illumina NGS platform. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages

All features generated by this experiment:
Feature Export
BindingSite 1088735
This represents 1088610 unique BindingSites
TAB CSV GFF3 (for UCSC) SEQ
DepletedRegion 215 TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 57 ChIP-seq submissions for this experiment:
DCC id Name developmental stage antibody cell line strain tissue Embargoed until Features, GBrowse and Data Files
modENCODE_3957

Solexa.Pc.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
Pc [ALL]
target: Polycomb
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 2594   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1948.enrichment.clusters.gff3: 1189   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1816.enrichment.clusters.gff3: 1405   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPSEQ_POLYCOMB_OR


6 files Download data files
modENCODE_3956

Solexa.HP1 wa191.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 25393   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.16024174.enrichment.clusters.gff3: 5697   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1914.enrichment.clusters.gff3: 5406   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2026.enrichment.clusters.gff3: 4903   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1916.enrichment.clusters.gff3: 5127   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2027.enrichment.clusters.gff3: 4260   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1_wa191_14-16_hr_OR_embryo
GEO: GSM1147117
GEO: GSM1147118
GEO: GSM1147119
GEO: GSM1147120
GEO: GSM1147121
...All entries in public repositories generated by this submission



13 files Download data files
modENCODE_3959

Solexa.CP190-HB.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
CP190-HB [ALL]
target: Centrosomal protein 190kD
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17321   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1963.enrichment.clusters.gff3: 4461   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1971.enrichment.clusters.gff3: 4900   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400046.enrichment.clusters.gff3: 7960   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CP190_HB_14-16_hr_OR_embryo
GEO: GSM1147133
GEO: GSM1147134
GEO: GSM1147135
GEO: GSM1147136


7 files Download data files
modENCODE_3960

Solexa.Psc.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
Psc [ALL]
target: Posterior sex combs
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13747   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1949.enrichment.clusters.gff3: 2432   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1817.enrichment.clusters.gff3: 2628   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400034.enrichment.clusters.gff3: 8687   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Psc_14-16_hr_OR_embryo
GEO: GSM1147137
GEO: GSM1147138
GEO: GSM1147139
GEO: GSM1147140


7 files Download data files
modENCODE_3958

Solexa.SU(HW)-HB.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
SU(HW)-HB [ALL]
target: suppressor of Hairy wing
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 15554   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1824.enrichment.clusters.gff3: 5000   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400044.enrichment.clusters.gff3: 5892   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1965.enrichment.clusters.gff3: 4662   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SU_HW_HB_14-16_hr_OR_embryo
GEO: GSM1147129
GEO: GSM1147130
GEO: GSM1147131
GEO: GSM1147132


7 files Download data files
modENCODE_3954

Solexa.BEAF-HB.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
BEAF-HB [ALL]
target: Boundary element-associated factor of 32kD
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13546   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1972.enrichment.clusters.gff3: 4170   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1964.enrichment.clusters.gff3: 4350   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400048.enrichment.clusters.gff3: 5026   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: BEAF_HB_14-16_hr_OR_embryo
GEO: GSM1256853
GEO: GSM1256854
GEO: GSM1256855
GEO: GSM1256856


7 files Download data files
modENCODE_4943

'Su(var)3-7-Q3448.14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 22997   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2034.enrichment.clusters.gff3: 6099   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2035.enrichment.clusters.gff3: 6295   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153528.enrichment.clusters.gff3: 10603   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7_Q3448_14-16_hr_OR_embryo
GEO: GSM1147197
GEO: GSM1147198
GEO: GSM1147199
GEO: GSM1147200


7 files Download data files
modENCODE_5129

ZW5.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
ZW5 [ALL]
target: deformed wings
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 6865   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400881.enrichment.clusters.gff3: 5135   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1966.enrichment.clusters.gff3: 1057   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1827.enrichment.clusters.gff3: 673   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ZW5_14-16_hr_OR_embryo
GEO: GSM1147433
GEO: GSM1147434
GEO: GSM1147435
GEO: GSM1147436


7 files Download data files
modENCODE_5127

Su(var)3-7-Q3448.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23087   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2236.enrichment.clusters.gff3: 5617   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2235.enrichment.clusters.gff3: 5994   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482425.enrichment.clusters.gff3: 11476   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7-Q3448_L3_OR_Nuc
GEO: GSM1147429
GEO: GSM1147430
GEO: GSM1147431
GEO: GSM1147432


7 files Download data files
modENCODE_4119

GAF.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
GAF [ALL]
target: Trithorax-like
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17897   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400880.enrichment.clusters.gff3: 6474   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1951.enrichment.clusters.gff3: 5706   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1973.enrichment.clusters.gff3: 5717   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 210   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: GAF_14-16_hr_OR_embryo
GEO: GSM1147141
GEO: GSM1147142
GEO: GSM1147143
GEO: GSM1147144


7 files Download data files
modENCODE_5128

'Su(var)3-9-Q2598.D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
Su(var)3-9-Q2598 [ALL]
target: Suppressor of variegation 3-9
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 38684   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2233.enrichment.clusters.gff3: 6699   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2234.enrichment.clusters.gff3: 10048   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482455.enrichment.clusters.gff3: 21937   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su.var.3-9-Q2598.L3
GEO: GSM1200103
GEO: GSM1200104
GEO: GSM1200105
GEO: GSM1200106


7 files Download data files
modENCODE_5125

RPD3-Q3451.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
RPD3-Q3451 [ALL]
target: Rpd3
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 34061   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2485.enrichment.clusters.gff3: 7654   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2484.enrichment.clusters.gff3: 7041   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482454.enrichment.clusters.gff3: 19366   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1147421
GEO: GSM1147422
GEO: GSM1147423
GEO: GSM1147424


7 files Download data files
modENCODE_5126

RPD3-Q3451.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
RPD3-Q3451 [ALL]
target: Rpd3
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17633   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2232.enrichment.clusters.gff3: 4991   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2231.enrichment.clusters.gff3: 5496   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482407.enrichment.clusters.gff3: 7146   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPD3_Q3451_L3_OR_Nuc
GEO: GSM1147425
GEO: GSM1147426
GEO: GSM1147427
GEO: GSM1147428


7 files Download data files
modENCODE_5123

RNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 22333   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2256.enrichment.clusters.gff3: 7524   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481745.enrichment.clusters.gff3: 8320   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2412.enrichment.clusters.gff3: 6489   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNA_Pol_II_abcam_L3_OR_Nuc
GEO: GSM1147413
GEO: GSM1147414
GEO: GSM1147415
GEO: GSM1147416


7 files Download data files
modENCODE_4944

HP4 Q4072.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
HP4 Q4072 [ALL]
target: Heterochromatin protein 4
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 9743   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1650.enrichment.clusters.gff3: 2674   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402386.enrichment.clusters.gff3: 4366   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1649.enrichment.clusters.gff3: 2703   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP4_Q4072_14-16_hr_OR_embryo
GEO: GSM1147201
GEO: GSM1147202
GEO: GSM1147203
GEO: GSM1147204


7 files Download data files
modENCODE_5124

RNA Pol II (abcam).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 19192   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482235.enrichment.clusters.gff3: 6802   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2414.enrichment.clusters.gff3: 6171   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2419.enrichment.clusters.gff3: 6219   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNA_Pol_II_abcam_OR_Head_Nuc
GEO: GSM1147417
GEO: GSM1147418
GEO: GSM1147419
GEO: GSM1147420


7 files Download data files
modENCODE_5571

RLPII phospho5 ab5131.Kc.Solexa RLPII_phospho5_ab5131 [ALL]
target: RNA polymerase II 215kD subunit
Kc167 [ALL]
embargo expired
BindingSite: 14870   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2466.enrichment.clusters.gff3: 4838   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972707.enrichment.clusters.gff3: 5141   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2465.enrichment.clusters.gff3: 4891   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RLPII.phospho5.ab5131.Kc
GEO: GSM1200119
GEO: GSM1200120
GEO: GSM1200121
GEO: GSM1200122


7 files Download data files
modENCODE_5570

RLPII phospho2 ab5095.Kc.Solexa RLPII_phospho2_ab5095 [ALL]
target: RNA polymerase II 215kD subunit
Kc167 [ALL]
embargo expired
BindingSite: 16059   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2462.enrichment.clusters.gff3: 5204   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972700.enrichment.clusters.gff3: 5640   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2461.enrichment.clusters.gff3: 5215   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RLPII.phospho2.ab5095.Kc
GEO: GSM1200115
GEO: GSM1200116
GEO: GSM1200117
GEO: GSM1200118


7 files Download data files
modENCODE_5072

dSFMBT Q2642.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 21274   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2425.enrichment.clusters.gff3: 5514   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2426.enrichment.clusters.gff3: 6004   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482408.enrichment.clusters.gff3: 9756   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dSFMBTQ2642.L3
GEO: GSM1180071
GEO: GSM1180072
GEO: GSM1180073
GEO: GSM1180074


7 files Download data files
modENCODE_5568

'Smc3 Q2580.D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
Smc3_Q2580 [ALL]
target: Chromosome-associated protein
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 30146   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2498.enrichment.clusters.gff3: 6505   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972797.enrichment.clusters.gff3: 15783   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2497.enrichment.clusters.gff3: 7858   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Smc3_Q2580.L3
GEO: GSM1256865
GEO: GSM1256866
GEO: GSM1256867
GEO: GSM1256868


7 files Download data files
modENCODE_5569

RPLII ab5408.Kc.Solexa RPLII_ab5408 [ALL]
target: RNA polymerase II 215kD subunit
Kc167 [ALL]
embargo expired
BindingSite: 15381   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2458.enrichment.clusters.gff3: 4988   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2457.enrichment.clusters.gff3: 5014   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972702.enrichment.clusters.gff3: 5379   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPLII.ab5408.Kc
GEO: GSM1180087
GEO: GSM1180088
GEO: GSM1180089
GEO: GSM1180090


7 files Download data files
modENCODE_5068

Chro(Chriz)WR.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
Chro(Chriz)WR [ALL]
target: Chromator
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13590   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401438.enrichment.clusters.gff3: 5762   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1711.enrichment.clusters.gff3: 3987   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1721.enrichment.clusters.gff3: 3841   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Chro_Chriz_WR_14-16_hr_OR_embryo
GEO: GSM1147249
GEO: GSM1147250
GEO: GSM1147251
GEO: GSM1147252


7 files Download data files
modENCODE_5069

CTCF.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
CTCF [ALL]
target: CTCF
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 8377   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1967.enrichment.clusters.gff3: 2080   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400882.enrichment.clusters.gff3: 3889   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1825.enrichment.clusters.gff3: 2408   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CTCF_14-16_hr_OR_embryo
GEO: GSM1147253
GEO: GSM1147254
GEO: GSM1147255
GEO: GSM1147256


7 files Download data files
modENCODE_5070

dMi-2(Q4443).14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
dMi-2(Q4443) [ALL] / Mi-2
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 18960   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482426.enrichment.clusters.gff3: 9388   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2448.enrichment.clusters.gff3: 5359   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2447.enrichment.clusters.gff3: 4213   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dMi-2_Q4443_14-16_hr_OR_embryo
GEO: GSM1147257
GEO: GSM1147258
GEO: GSM1147259
GEO: GSM1147260


7 files Download data files
modENCODE_5264

'HP2 (Ab2-90).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
HP2 (Ab2-90) [ALL]
target: Su(var)2-HP2
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13989   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401446.enrichment.clusters.gff3: 5179   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2028.enrichment.clusters.gff3: 3132   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1736.enrichment.clusters.gff3: 2488   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2029.enrichment.clusters.gff3: 3190   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP2_Ab2_90_14-16_hr_OR_embryo
GEO: GSM1147453
GEO: GSM1147454
GEO: GSM1147455
GEO: GSM1147456
GEO: GSM1147457
...All entries in public repositories generated by this submission



10 files Download data files
modENCODE_5071

dRING Q3200.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
dRING Q3200 [ALL]
target: Sex combs extra
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13999   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1819.enrichment.clusters.gff3: 3473   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153529.enrichment.clusters.gff3: 7465   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2065.enrichment.clusters.gff3: 3061   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dRING_Q3200_14-16_hr_OR_embryo
GEO: GSM1147261
GEO: GSM1147262
GEO: GSM1147263
GEO: GSM1147264


7 files Download data files
modENCODE_5257

H1.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H1 [ALL] /
target: H1
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 27491   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1725.enrichment.clusters.gff3: 2185   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401445.enrichment.clusters.gff3: 16190   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1715.enrichment.clusters.gff3: 2820   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2291.enrichment.clusters.gff3: 2886   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2292.enrichment.clusters.gff3: 3410   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H1_14-16_hr_OR_embryo
GEO: GSM1147437
GEO: GSM1147438
GEO: GSM1147439
GEO: GSM1147440
GEO: GSM1147441
...All entries in public repositories generated by this submission



13 files Download data files
modENCODE_5574

LSD1 Q3430.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 29045   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972796.enrichment.clusters.gff3: 11019   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2422.enrichment.clusters.gff3: 9911   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2421.enrichment.clusters.gff3: 8115   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430_OR_Head_Nuc
GEO: GSM1147459
GEO: GSM1147460
GEO: GSM1147461
GEO: GSM1147462


7 files Download data files
modENCODE_5576

RLPII phospho2 ab5095.Clone 8.Solexa RLPII_phospho2_ab5095 [ALL]
target: RNA polymerase II 215kD subunit
CME W1 Cl.8+ [ALL]
embargo expired
BindingSite: 16326   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972794.enrichment.clusters.gff3: 5826   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2463.enrichment.clusters.gff3: 5329   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2464.enrichment.clusters.gff3: 5171   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RLPII.phospho2.ab5095.Clone.8
GEO: GSM1180091
GEO: GSM1180092
GEO: GSM1180093
GEO: GSM1180094


7 files Download data files
modENCODE_5575

JHDM1 Q2634.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
JHDM1_Q2634 [ALL]
target: Lysine (K)-specific demethylase 2
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 22915   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2406.enrichment.clusters.gff3: 7836   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2407.enrichment.clusters.gff3: 7074   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972795.enrichment.clusters.gff3: 8005   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JHDM1_Q2634_OR_Head_Nuc
GEO: GSM1147463
GEO: GSM1147464
GEO: GSM1147465
GEO: GSM1147466


7 files Download data files
modENCODE_5577

dSFMBT Q2642.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 21502   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2427.enrichment.clusters.gff3: 6560   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972728.enrichment.clusters.gff3: 8434   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2428.enrichment.clusters.gff3: 6508   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dSFMBT_Q2642_OR_Head_Nuc
GEO: GSM1147467
GEO: GSM1147468
GEO: GSM1147469
GEO: GSM1147470


7 files Download data files
modENCODE_5580

RPLII ab5408.Clone 8.Solexa RPLII_ab5408 [ALL]
target: RNA polymerase II 215kD subunit
CME W1 Cl.8+ [ALL]
embargo expired
BindingSite: 15739   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2460.enrichment.clusters.gff3: 5064   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2459.enrichment.clusters.gff3: 5141   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972799.enrichment.clusters.gff3: 5534   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPLII_ab5408.Clone_8
GEO: GSM1200127
GEO: GSM1200128
GEO: GSM1200129
GEO: GSM1200130


7 files Download data files
modENCODE_5579

RLPII phospho5 ab5131.Clone 8.Solexa RLPII_phospho5_ab5131 [ALL]
target: RNA polymerase II 215kD subunit
CME W1 Cl.8+ [ALL]
embargo expired
BindingSite: 15295   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972800.enrichment.clusters.gff3: 5327   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2467.enrichment.clusters.gff3: 5091   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2468.enrichment.clusters.gff3: 4877   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RLPII.phospho5.ab5131.Clone.8
GEO: GSM1200123
GEO: GSM1200124
GEO: GSM1200125
GEO: GSM1200126


7 files Download data files
modENCODE_5587

'HP1c (MO 462).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
HP1c (MO 462) [ALL]
target: Heterochromatin Protein 1c
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17491   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2541.enrichment.clusters.gff3: 4801   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153511.enrichment.clusters.gff3: 8021   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2032.enrichment.clusters.gff3: 4669   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1c_MO_462_14-16_hr_OR_embryo
GEO: GSM1147499
GEO: GSM1147500
GEO: GSM1147501
GEO: GSM1147502


7 files Download data files
modENCODE_5590

HP1b Q4114.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
HP1b Q4114 [ALL]
target: Heterochromatin Protein 1b
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 20977   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2195.enrichment.clusters.gff3: 6687   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972723.enrichment.clusters.gff3: 7819   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2196.enrichment.clusters.gff3: 6471   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1b_Q4114_OR_Head_Nuc
GEO: GSM1147511
GEO: GSM1147512
GEO: GSM1147513
GEO: GSM1147514


7 files Download data files
modENCODE_5591

HP1c (MO 462).OR Head Nuclei.Solexa. Mixed Adults 22 days AEL [ALL]
HP1c (MO 462) [ALL]
target: Heterochromatin Protein 1c
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 18906   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2197.enrichment.clusters.gff3: 6010   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972729.enrichment.clusters.gff3: 7131   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2198.enrichment.clusters.gff3: 5765   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1c_MO_462_OR_Head_Nuc
GEO: GSM1147515
GEO: GSM1147516
GEO: GSM1147517
GEO: GSM1147518


7 files Download data files
modENCODE_5592

HP1 wa191.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 13616   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2217.enrichment.clusters.gff3: 3564   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972733.enrichment.clusters.gff3: 5585   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2218.enrichment.clusters.gff3: 4467   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1_wa191_OR_Head_Nuc
GEO: GSM1147519
GEO: GSM1147520
GEO: GSM1147521
GEO: GSM1147522


7 files Download data files
modENCODE_5593

HP2 (Ab2-90).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
HP2 (Ab2-90) [ALL]
target: Su(var)2-HP2
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 15928   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972730.enrichment.clusters.gff3: 7037   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2194.enrichment.clusters.gff3: 4163   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2193.enrichment.clusters.gff3: 4728   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP2_Ab2_90_OR_Head_Nuc
GEO: GSM1147523
GEO: GSM1147524
GEO: GSM1147525
GEO: GSM1147526


7 files Download data files
modENCODE_5594

JMJD2A-KDM4A Q2541.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
JMJD2A-KDM4A_Q2541 [ALL]
target: Histone demethylase 4A
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 22692   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2314.enrichment.clusters.gff3: 6656   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972727.enrichment.clusters.gff3: 8654   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2315.enrichment.clusters.gff3: 7382   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JMJD2A_KDM4A_Q2541_OR_Head_Nuc
GEO: GSM1147527
GEO: GSM1147528
GEO: GSM1147529
GEO: GSM1147530


7 files Download data files
modENCODE_5597

LSD1 Q3430.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23494   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2500.enrichment.clusters.gff3: 7936   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2499.enrichment.clusters.gff3: 5704   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972710.enrichment.clusters.gff3: 9854   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430_L3_OR_Nuc
GEO: GSM1147531
GEO: GSM1147532
GEO: GSM1147533
GEO: GSM1147534


7 files Download data files
modENCODE_5116

LSD1 Q3430.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 15576   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1749.enrichment.clusters.gff3: 2607   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400878.enrichment.clusters.gff3: 9018   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1748.enrichment.clusters.gff3: 3951   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430_14-16_hr_OR_embryo
GEO: GSM1147389
GEO: GSM1147390
GEO: GSM1147391
GEO: GSM1147392


7 files Download data files
modENCODE_5115

JMJD2A-KDM4A Q2541.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
JMJD2A-KDM4A_Q2541 [ALL]
target: Histone demethylase 4A
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 28286   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2385.enrichment.clusters.gff3: 5780   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2384.enrichment.clusters.gff3: 11489   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482422.enrichment.clusters.gff3: 11017   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JMJD2A-KDM4A_Q2541.L3
GEO: GSM1256857
GEO: GSM1256858
GEO: GSM1256859
GEO: GSM1256860


7 files Download data files
modENCODE_5118

MOF Q4145.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
MOF_Q4145 [ALL]
target: males absent on the first
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 14301   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1713.enrichment.clusters.gff3: 4158   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401447.enrichment.clusters.gff3: 6232   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1723.enrichment.clusters.gff3: 3911   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MOF_Q4145_14-16_hr_OR_embryo
GEO: GSM1147397
GEO: GSM1147398
GEO: GSM1147399
GEO: GSM1147400


7 files Download data files
modENCODE_5117

'MBD-R2(Q4167).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
MBD-R2(Q4167) [ALL]
target: MBD-R2
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 16201   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2443.enrichment.clusters.gff3: 4586   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2444.enrichment.clusters.gff3: 4789   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482481.enrichment.clusters.gff3: 6826   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MBD_R2_Q4167_14-16_hr_OR_embryo
GEO: GSM1147393
GEO: GSM1147394
GEO: GSM1147395
GEO: GSM1147396


7 files Download data files
modENCODE_5120

'POF (MO 459).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17481   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1653.enrichment.clusters.gff3: 3139   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401437.enrichment.clusters.gff3: 11489   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1654.enrichment.clusters.gff3: 2853   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO_459_14-16_hr_OR_embryo
GEO: GSM1147405
GEO: GSM1147406
GEO: GSM1147407
GEO: GSM1147408


7 files Download data files
modENCODE_5119

NURF301 Q2602.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
NURF301_Q2602 [ALL]
target: Enhancer of bithorax
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 20120   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482245.enrichment.clusters.gff3: 8224   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2455.enrichment.clusters.gff3: 5576   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2456.enrichment.clusters.gff3: 6320   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: NURF301_Q2602_14-16_hr_OR_embryo
RPD3_Q3451_14-16_hr_OR_embryo
GEO: GSM1147401
GEO: GSM1147402
GEO: GSM1147403
GEO: GSM1147404


7 files Download data files
modENCODE_5599

RPD3-Q3451.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
RPD3-Q3451 [ALL]
target: Rpd3
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 18809   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2413.enrichment.clusters.gff3: 5550   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2418.enrichment.clusters.gff3: 5872   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972699.enrichment.clusters.gff3: 7387   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPD3_Q3451_OR_Head_Nuc
GEO: GSM1147539
GEO: GSM1147540
GEO: GSM1147541
GEO: GSM1147542


7 files Download data files
modENCODE_5122

'RNA Pol II (abcam).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 20276   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2481.enrichment.clusters.gff3: 5199   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482429.enrichment.clusters.gff3: 9885   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2480.enrichment.clusters.gff3: 5192   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNA_Pol_II_abcam_14-16_hr_OR_embryo
GEO: GSM1147409
GEO: GSM1147410
GEO: GSM1147411
GEO: GSM1147412


7 files Download data files
modENCODE_5598

POF (MO 459).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 20872   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2204.enrichment.clusters.gff3: 5227   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972704.enrichment.clusters.gff3: 9072   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2203.enrichment.clusters.gff3: 6573   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO_459_OR_Head_Nuc
GEO: GSM1147535
GEO: GSM1147536
GEO: GSM1147537
GEO: GSM1147538


7 files Download data files
modENCODE_4936

HP1 wa191.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 10053   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2266.enrichment.clusters.gff3: 3052   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481600.enrichment.clusters.gff3: 3891   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2265.enrichment.clusters.gff3: 3110   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1_wa191_L3_OR_nuc
GEO: GSM1147169
GEO: GSM1147170
GEO: GSM1147171
GEO: GSM1147172


7 files Download data files
modENCODE_5121

'POF (MO 459).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 32794   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2237.enrichment.clusters.gff3: 6433   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482424.enrichment.clusters.gff3: 20575   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2238.enrichment.clusters.gff3: 5786   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF.MO459.L3
GEO: GSM1256861
GEO: GSM1256862
GEO: GSM1256863
GEO: GSM1256864


7 files Download data files
modENCODE_5111

HP1b Q4114.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
HP1b Q4114 [ALL]
target: Heterochromatin Protein 1b
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 19011   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153514.enrichment.clusters.gff3: 9130   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2031.enrichment.clusters.gff3: 4633   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2030.enrichment.clusters.gff3: 5248   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1b_Q4114_14-16_hr_OR_embryo
GEO: GSM1147377
GEO: GSM1147378
GEO: GSM1147379
GEO: GSM1147380


7 files Download data files
modENCODE_5110

'HP1b (Henikoff).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
HP1b (Henikoff) [ALL]
target: Heterochromatin Protein 1b
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 19957   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2252.enrichment.clusters.gff3: 6338   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482243.enrichment.clusters.gff3: 8428   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2251.enrichment.clusters.gff3: 5191   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1b.Henikoff.L3
GEO: GSM1180083
GEO: GSM1180084
GEO: GSM1180085
GEO: GSM1180086


7 files Download data files
modENCODE_5113

HP2 (Ab2-90).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
HP2 (Ab2-90) [ALL]
target: Su(var)2-HP2
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23769   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482239.enrichment.clusters.gff3: 12660   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2247.enrichment.clusters.gff3: 4092   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2248.enrichment.clusters.gff3: 7017   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP2_Ab2_90_L3_OR_Nuc
GEO: GSM1147381
GEO: GSM1147382
GEO: GSM1147383
GEO: GSM1147384


7 files Download data files
modENCODE_5112

'HP1c (MO 462).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
HP1c (MO 462) [ALL]
target: Heterochromatin Protein 1c
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 18434   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482244.enrichment.clusters.gff3: 6902   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2243.enrichment.clusters.gff3: 5586   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2244.enrichment.clusters.gff3: 5946   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1c.MO462.L3
GEO: GSM1200099
GEO: GSM1200100
GEO: GSM1200101
GEO: GSM1200102


7 files Download data files
modENCODE_5114

JHDM1 Q2634.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
JHDM1_Q2634 [ALL]
target: Lysine (K)-specific demethylase 2
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 21171   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2098.enrichment.clusters.gff3: 4805   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401441.enrichment.clusters.gff3: 11598   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1664.enrichment.clusters.gff3: 4768   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JHDM1_Q2634_14-16_hr_OR_embryo
GEO: GSM1147385
GEO: GSM1147386
GEO: GSM1147387
GEO: GSM1147388


7 files Download data files
modENCODE_5606

Su(var)3-7-Q3448.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 22915   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2220.enrichment.clusters.gff3: 6658   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972705.enrichment.clusters.gff3: 9477   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2219.enrichment.clusters.gff3: 6780   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7_Q3448_OR_Head_Nuc
GEO: GSM1147543
GEO: GSM1147544
GEO: GSM1147545
GEO: GSM1147546


7 files Download data files