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Genomic Distributions of non-Histone Chromosomal Proteins in D. melanogaster

experiment: Genomic Distributions of non-Histone Chromosomal Proteins in D. melanogaster project: Chromosomal Proteins PI: Gary Karpen Labs: Gary Karpen, Mitzi Kuroda, Sarah Elgin, Vincent Pirrotta
We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages

All features generated by this experiment:
Feature Export
BindingSite ? 413091
This represents 357028 unique BindingSites 		TAB CSV GFF3 (for UCSC) SEQ
DepletedRegion 158401
This represents 144799 unique DepletedRegions 		TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 162 ChIP-chip submissions for this experiment:
DCC id Name developmental stage antibody cell line strain tissue Embargoed until Features, GBrowse and Data Files
modENCODE_5146

 SPT16(Cosmo).S2 SPT16(Cosmo) [ALL]
target: dre4
 S2-DRSC [ALL]
embargo expired
? BindingSite: 1325   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 79   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096857
GEO: GSM1096858
GEO: GSM1096859
GEO: GSM1096860


8 files Download data files
modENCODE_2988

 EZ-Q3421.S2 EZ-Q3421 [ALL]
target: Enhancer of zeste
 S2-DRSC [ALL]
embargo expired
? BindingSite: 391   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: EZ-Q3421.S2
EZ-Q3421.S2
GEO: GSM686481
GEO: GSM686482
GEO: GSM686483


7 files Download data files
modENCODE_5132

 dSFMBT Q2642.Kc dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
 Kc167 [ALL]
embargo expired
? BindingSite: 1825   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 11   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096801
GEO: GSM1096802
GEO: GSM1096803
GEO: GSM1096804


8 files Download data files
modENCODE_4127

 HP1b Q4113.Kc HP1b Q4113 [ALL]
target: Heterochromatin Protein 1b
 Kc167 [ALL]
embargo expired
? BindingSite: 2553   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 674   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1bQ4113.Kc
HP1bQ4113.Kc
GEO: GSM1085988
GEO: GSM1085989
GEO: GSM1085990
GEO: GSM1085991


8 files Download data files
modENCODE_5131

 CP190-HB.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
CP190-HB [ALL]
target: Centrosomal protein 190kD
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1426   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 8   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096797
GEO: GSM1096798
GEO: GSM1096799
GEO: GSM1096800


8 files Download data files
modENCODE_4126

 HP1a wa184.BG3 HP1a wa184 [ALL]
target: Suppressor of variegation 205
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 752   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2827   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1awa184.BG3
HP1awa184.BG3
GEO: GSM1085984
GEO: GSM1085985
GEO: GSM1085986
GEO: GSM1085987


8 files Download data files
modENCODE_5130

 BEAF-HB.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
BEAF-HB [ALL]
target: Boundary element-associated factor of 32kD
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 4416   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 480   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096793
GEO: GSM1096794
GEO: GSM1096795
GEO: GSM1096796


8 files Download data files
modENCODE_3945

 Dm Topo II(DAJ).S2 dmTopo II(DAJ) [ALL]
target: Topoisomerase 2
 S2-DRSC [ALL]
embargo expired
? BindingSite: 3964   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 407   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dmTopoII_DAJ_S2
dmTopoII_DAJ_S2
GEO: GSM1085959
GEO: GSM1085960
GEO: GSM1085961
GEO: GSM1085962


8 files Download data files
modENCODE_3898

 Su(var)3-9-Q2598.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
Su(var)3-9-Q2598 [ALL]
target: Suppressor of variegation 3-9
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 727   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 90   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_HISMODENZ_L3
KARPEN_CHIPCHIP_HISMODENZ_L3
KARPEN_CHIPCHIP_HISMODENZ_L3
KARPEN_CHIPCHIP_HISMODENZ_L3
GEO: GSM812290
GEO: GSM812291
GEO: GSM812292
GEO: GSM812293
GEO: GSM812294
...All entries in public repositories generated by this submission



13 files Download data files
modENCODE_5265

 ZW5.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
ZW5 [ALL]
target: deformed wings
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 173   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096877
GEO: GSM1096878
GEO: GSM1096879
GEO: GSM1096880


8 files Download data files
modENCODE_3899

 Su(var)3-9-Q2598.Kc Su(var)3-9-Q2598 [ALL]
target: Suppressor of variegation 3-9
 Kc167 [ALL]
embargo expired
? BindingSite: 236   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1478   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-9-Q2598.Kc
Su_var_3-9-Q2598.Kc
GEO: GSM812297
GEO: GSM812298
GEO: GSM812299
GEO: GSM812300


8 files Download data files
modENCODE_5263

 HP1 wa191.D.mel 3rd Instar Larvae Nuclei AGO2 414 mutant 3rd Instar Larvae [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
 Ago2[414] [ALL]
embargo expired
? BindingSite: 1828   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 28   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096873
GEO: GSM1096874
GEO: GSM1096875
GEO: GSM1096876


8 files Download data files
modENCODE_2986

 dSFMBT Q2642.BG3 dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 2296   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 195   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dSFMBTQ2642.BG3
dSFMBTQ2642.BG3
GEO: GSM686473
GEO: GSM686474
GEO: GSM686475
GEO: GSM686476


8 files Download data files
modENCODE_3952

 POF (MO 459).2-4 hr OR embryo Embryo 2-4hr OR [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 184   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 338   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1093425
GEO: GSM1093426
GEO: GSM1093427
GEO: GSM1093428


8 files Download data files
modENCODE_2987

 EZ-Q3421.BG3 EZ-Q3421 [ALL]
target: Enhancer of zeste
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 531   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 10   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: EZ-Q3421.BG3
EZ-Q3421.BG3
GEO: GSM686477
GEO: GSM686478
GEO: GSM686479
GEO: GSM686480


8 files Download data files
modENCODE_5148

 WDS Q2691.BG3 WDS_Q2691 [ALL]
target: will die slowly
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 2484   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096861
GEO: GSM1096862
GEO: GSM1096863
GEO: GSM1096864


8 files Download data files
modENCODE_3947

 HP1 wa191.ovary Adult Female [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
 Oregon-R-modENCODE [ALL]
Ovary [ALL]
embargo expired
? BindingSite: 2665   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2546   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_CHROMPROT_ADULTF_OVARY
KARPEN_CHIPCHIP_CHROMPROT_ADULTF_OVARY
GEO: GSM1108047
GEO: GSM1108048
GEO: GSM1108049
GEO: GSM1108050


8 files Download data files
modENCODE_3295

 RNA Pol II (abcam).S2 RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
 S2-DRSC [ALL]
embargo expired
? BindingSite: 5804   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2955   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNAPolII_abcam.S2
RNAPolII_abcam.S2
GEO: GSM811888
GEO: GSM811889
GEO: GSM811890
GEO: GSM811891


8 files Download data files
modENCODE_5255

 dRING Q3200.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
dRING Q3200 [ALL]
target: Sex combs extra
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 380   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 46   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_REMODEL_OR
KARPEN_CHIPCHIP_REMODEL_OR
GEO: GSM1096865
GEO: GSM1096866
GEO: GSM1096867
GEO: GSM1096868


8 files Download data files
modENCODE_5256

 dSFMBT Q2642.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 852   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 69   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096869
GEO: GSM1096870
GEO: GSM1096871
GEO: GSM1096872


8 files Download data files
modENCODE_3949

 LSD1 Q3430.S2 LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
 S2-DRSC [ALL]
embargo expired
? BindingSite: 4162   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2228   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430.S2
LSD1_Q3430.S2
GEO: GSM1085968
GEO: GSM1085969
GEO: GSM1085970
GEO: GSM1085971


8 files Download data files
modENCODE_3948

 HP4 Q4072.S2 HP4 Q4072 [ALL]
target: Heterochromatin protein 4
 S2-DRSC [ALL]
embargo expired
? BindingSite: 467   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1234   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP4Q4072.S2
HP4Q4072.S2
GEO: GSM1085963
GEO: GSM1085964
GEO: GSM1085965
GEO: GSM1085966
GEO: GSM1085967


10 files Download data files
modENCODE_3297

 Su(var)3-7-Q3448.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1889   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 751   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7-Q3448.14-16hrORembryo
Su_var_3-7-Q3448.14-16hrORembryo
GEO: GSM811896
GEO: GSM811897
GEO: GSM811898
GEO: GSM811899


8 files Download data files
modENCODE_3950

 MRG15 Q2482.S2 MRG15_Q2482 [ALL]
target: MRG15
 S2-DRSC [ALL]
embargo expired
? BindingSite: 5797   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1367   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MRG15_Q2482.S2
MRG15_Q2482.S2
GEO: GSM1085972
GEO: GSM1085973
GEO: GSM1085974
GEO: GSM1085975


8 files Download data files
modENCODE_3951

 PIWI-Q2569.D.mel 3rd Instar Larvae Nuclei piwi2 mutant 3rd Instar Larvae [ALL]
PIWI-Q2569 [ALL]
target: piwi
 piwi2 [ALL]
embargo expired
? BindingSite: 505   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_REMODEL_L3MUT
KARPEN_CHIPCHIP_REMODEL_L3MUT
KARPEN_CHIPCHIP_REMODEL_L3MUT
KARPEN_CHIPCHIP_REMODEL_L3MUT
GEO: GSM1085976
GEO: GSM1085977
GEO: GSM1085978
GEO: GSM1085979


8 files Download data files
modENCODE_2984

 ASH1 Q4177.S2 ASH1 Q4177 [ALL]
target: absent, small, or homeotic discs 1
 S2-DRSC [ALL]
embargo expired
? BindingSite: 1813   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 99   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ASH1Q4177.S2
ASH1Q4177.S2


8 files Download data files
modENCODE_3296

 RPD3-Q3451.Kc RPD3-Q3451 [ALL]
target: Rpd3
 Kc167 [ALL]
embargo expired
? BindingSite: 4150   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1094   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPD3-Q3451.Kc
RPD3-Q3451.Kc
GEO: GSM811892
GEO: GSM811893
GEO: GSM811894
GEO: GSM811895


8 files Download data files
modENCODE_3293

 MSL-1(Q4453).S2 MSL-1(Q4453) [ALL]
target: male-specific lethal 1
 S2-DRSC [ALL]
embargo expired
? BindingSite: 2081   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 76   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MSL-1_Q4453.S2
MSL-1_Q4453.S2
GEO: GSM811880
GEO: GSM811881
GEO: GSM811882
GEO: GSM811883


8 files Download data files
modENCODE_3804

 ZW5.S2 ZW5 [ALL]
target: deformed wings
 S2-DRSC [ALL]
embargo expired
? BindingSite: 2708   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 68   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ZW5.S2
ZW5.S2
GEO: GSM812262
GEO: GSM812263
GEO: GSM812264
GEO: GSM812265


8 files Download data files
modENCODE_3294

 POF.S2 POF [ALL]
target: Painting of fourth
 S2-DRSC [ALL]
embargo expired
? BindingSite: 941   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 78   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF.S2
POF.S2
GEO: GSM811884
GEO: GSM811885
GEO: GSM811886
GEO: GSM811887


8 files Download data files
modENCODE_3802

 Su(var)3-9-Q2598.OR Head Nuclei Mixed Adults 22 days AEL [ALL]
Su(var)3-9-Q2598 [ALL]
target: Suppressor of variegation 3-9
 Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 2974   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4317   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-9-Q2598.ORHeadnuc
Su_var_3-9-Q2598.ORHeadnuc
GEO: GSM1085915
GEO: GSM1085916
GEO: GSM1085917
GEO: GSM1085918


8 files Download data files
modENCODE_3803

 ZW5.Kc ZW5 [ALL]
target: deformed wings
 Kc167 [ALL]
embargo expired
? BindingSite: 481   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ZW5.Kc
ZW5.Kc
GEO: GSM812258
GEO: GSM812259
GEO: GSM812260
GEO: GSM812261


8 files Download data files
modENCODE_3291

 HP1c Q4064.S2 HP1c Q4064 [ALL]
target: Heterochromatin Protein 1c
 S2-DRSC [ALL]
embargo expired
? BindingSite: 3601   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 890   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1cQ4064.S2
HP1cQ4064.S2
GEO: GSM811872
GEO: GSM811873
GEO: GSM811874
GEO: GSM811875


8 files Download data files
modENCODE_3801

 SU(HW)-HB.Kc SU(HW)-HB [ALL]
target: suppressor of Hairy wing
 Kc167 [ALL]
embargo expired
? BindingSite: 3328   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 61   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1256130
GEO: GSM1256131
GEO: GSM1256132
GEO: GSM1256133


8 files Download data files
modENCODE_3292

 JIL1 Q3433.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
JIL1_Q3433 [ALL]
target: JIL-1
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 5563   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3019   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_DOSCOMP_L3
KARPEN_CHIPCHIP_DOSCOMP_L3
KARPEN_CHIPCHIP_DOSCOMP_L3
KARPEN_CHIPCHIP_DOSCOMP_L3
GEO: GSM811876
GEO: GSM811877
GEO: GSM811878
GEO: GSM811879


8 files Download data files
modENCODE_3799

 RNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 3820   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1284   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNAPolII_abcam.D.mel3rdInstarLarvaeNuclei
RNAPolII_abcam.D.mel3rdInstarLarvaeNuclei
GEO: GSM812248
GEO: GSM812249
GEO: GSM812250
GEO: GSM812251
GEO: GSM812252
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3290

 HP1b Q4114.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
HP1b Q4114 [ALL]
target: Heterochromatin Protein 1b
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 624   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 263   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1bQ4114.14-16hrORembryo
HP1bQ4114.14-16hrORembryo
GEO: GSM811868
GEO: GSM811869
GEO: GSM811870
GEO: GSM811871


8 files Download data files
modENCODE_3800

 Smc3 Q2580.Kc Smc3_Q2580 [ALL]
target: Chromosome-associated protein
 Kc167 [ALL]
embargo expired
? BindingSite: 2087   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 85   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Smc3_Q2580.Kc
Smc3_Q2580.Kc
GEO: GSM812254
GEO: GSM812255
GEO: GSM812256
GEO: GSM812257


8 files Download data files
modENCODE_3797

 Psc.Kc Psc [ALL]
target: Posterior sex combs
 Kc167 [ALL]
embargo expired
? BindingSite: 1398   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 82   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Psc.Kc
Psc.Kc
GEO: GSM812244
GEO: GSM812245
GEO: GSM812246
GEO: GSM812247


8 files Download data files
modENCODE_3798

 RNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei HP1a Mutant 3rd Instar Larvae [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
 SU(VAR)205 mutant [ALL]
embargo expired
? BindingSite: 2891   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 761   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RNAPolII_abcam_L3nucHP1aMutant
RNAPolII_abcam_L3nucHP1aMutant
GEO: GSM1085909
GEO: GSM1085910
GEO: GSM1085911
GEO: GSM1085912
GEO: GSM1085913
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3795

 POF (MO 459).D.mel 3rd Instar Larvae Nuclei Sexed Female 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 851   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 481   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459.D.mel3rdInstarLarvaeNucleiSexedFemale
POF_MO459.D.mel3rdInstarLarvaeNucleiSexedFemale
GEO: GSM812240
GEO: GSM812241
GEO: GSM812242
GEO: GSM812243


8 files Download data files
modENCODE_3796

 POF (MO 459).OR Head Nuclei Mixed Adults 22 days AEL [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 2628   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7492   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459_ORHeadnuc
POF_MO459_ORHeadnuc
GEO: GSM1085905
GEO: GSM1085906
GEO: GSM1085907
GEO: GSM1085908


8 files Download data files
modENCODE_3897

 POF (MO 459).S2 POF (MO 459) [ALL]
target: Painting of fourth
 S2-DRSC [ALL]
embargo expired
? BindingSite: 625   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 231   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459.S2
POF_MO459.S2
GEO: GSM812284
GEO: GSM812285
GEO: GSM812286
GEO: GSM812287
GEO: GSM812288
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3896

 POF (MO 459).D.mel 3rd Instar Larvae Nuclei HP1a Mutant 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 SU(VAR)205 mutant [ALL]
embargo expired
? BindingSite: 773   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 71   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459_L3nucHP1aMutant
POF_MO459_L3nucHP1aMutant
GEO: GSM1085943
GEO: GSM1085944
GEO: GSM1085945
GEO: GSM1085946


8 files Download data files
modENCODE_3895

 POF (MO 459).14-16 hr OR embryo Embryo 14-16hr OR [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 224   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 512   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459_14-16hrORembryo
POF_MO459_14-16hrORembryo
GEO: GSM1085939
GEO: GSM1085940
GEO: GSM1085941
GEO: GSM1085942


8 files Download data files
modENCODE_3281

 CTCF.S2 CTCF [ALL]
target: CTCF
 S2-DRSC [ALL]
embargo expired
? BindingSite: 1756   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 64   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CTCF.S2
CTCF.S2
GEO: GSM811828
GEO: GSM811829
GEO: GSM811830
GEO: GSM811831


8 files Download data files
modENCODE_3894

 Pho.S2 Pho [ALL]
target: pleiohomeotic
 S2-DRSC [ALL]
embargo expired
? BindingSite: 1843   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 59   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Pho.S2
Pho.S2
GEO: GSM812280
GEO: GSM812281
GEO: GSM812282
GEO: GSM812283


8 files Download data files
modENCODE_3892

 HP1 wa191.D.mel 3rd Instar Larvae Nuclei Su(var) 3-9 06 17 Mutant 3rd Instar Larvae [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
 Su(var)3-9^06/Su(var)3-9^17 [ALL]
embargo expired
? BindingSite: 1616   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 509   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1wa191.L3nucSu_var_3-9_06-17Mutant
HP1wa191.L3nucSu_var_3-9_06-17Mutant
GEO: GSM1085935
GEO: GSM1085936
GEO: GSM1085937
GEO: GSM1085938


8 files Download data files
modENCODE_3280

 CTCF.BG3 CTCF [ALL]
target: CTCF
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1324   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 98   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CTCF.BG3
CTCF.BG3
GEO: GSM811824
GEO: GSM811825
GEO: GSM811826
GEO: GSM811827


8 files Download data files
modENCODE_3279

 ASH1 Q4177.BG3 ASH1 Q4177 [ALL]
target: absent, small, or homeotic discs 1
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 2410   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 112   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ASH1Q4177.BG3
ASH1Q4177.BG3
GEO: GSM811820
GEO: GSM811821
GEO: GSM811822
GEO: GSM811823


8 files Download data files
modENCODE_3784

 JMJD2A Q2541.S2 JMJD2A-KDM4A_Q2541 [ALL]
target: Histone demethylase 4A
 S2-DRSC [ALL]
embargo expired
? BindingSite: 4179   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1374   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JMJD2A_Q2541.S2
JMJD2A_Q2541.S2
GEO: GSM812204
GEO: GSM812205
GEO: GSM812206
GEO: GSM812207


8 files Download data files
modENCODE_3785

 LSD1 Q3430.BG3 LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 5916   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3518   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430.BG3
LSD1_Q3430.BG3


8 files Download data files
modENCODE_3783

 JMJD2A-KDM4A Q2541.BG3 JMJD2A-KDM4A_Q2541 [ALL]
target: Histone demethylase 4A
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 2872   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 91   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JMJD2A-KDM4A_Q2541.BG3
JMJD2A-KDM4A_Q2541.BG3
GEO: GSM812200
GEO: GSM812201
GEO: GSM812202
GEO: GSM812203


8 files Download data files
modENCODE_3779

 HP1c (MO 462).OR Head Nuclei Mixed Adults 22 days AEL [ALL]
HP1c (MO 462) [ALL]
target: Heterochromatin Protein 1c
 Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 4167   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5986   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1c_MO462_ORHeadnuc
HP1c_MO462_ORHeadnuc
GEO: GSM1085883
GEO: GSM1085884
GEO: GSM1085885
GEO: GSM1085886


8 files Download data files
modENCODE_3780

 HP1 wa191.D.mel 3rd Instar Larvae Nuclei POF Mutant 3rd Instar Larvae [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
 POF D119 mutant [ALL]
embargo expired
? BindingSite: 1473   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 87   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1wa191.L3nucPOFMutant
HP1wa191.L3nucPOFMutant
GEO: GSM1085887
GEO: GSM1085888
GEO: GSM1085889
GEO: GSM1085890
GEO: GSM1085891


10 files Download data files
modENCODE_3781

 HP2 (Ab2-90).OR Head Nuclei Mixed Adults 22 days AEL [ALL]
HP2 (Ab2-90) [ALL]
target: Su(var)2-HP2
 Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 2217   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5982   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP2_Ab2-90_ORHeadnuc
HP2_Ab2-90_ORHeadnuc
GEO: GSM1085892
GEO: GSM1085893
GEO: GSM1085894
GEO: GSM1085895


8 files Download data files
modENCODE_3782

 HP4 Q4072.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
HP4 Q4072 [ALL]
target: Heterochromatin protein 4
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1076   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 11   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP4Q4072.D.mel3rdInstarLarvaeNuclei
HP4Q4072.D.mel3rdInstarLarvaeNuclei
GEO: GSM812196
GEO: GSM812197
GEO: GSM812198
GEO: GSM812199


8 files Download data files
modENCODE_3777

 HP1a hinge.S2 HP1a_hinge [ALL]
target: Suppressor of variegation 205
 S2-DRSC [ALL]
embargo expired
? BindingSite: 702   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 838   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1a_hinge.S2
HP1a_hinge.S2
GEO: GSM812192
GEO: GSM812193
GEO: GSM812194
GEO: GSM812195


8 files Download data files
modENCODE_3778

 HP1b Q4114.OR Head Nuclei Mixed Adults 22 days AEL [ALL]
HP1b Q4114 [ALL]
target: Heterochromatin Protein 1b
 Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 3920   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5269   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1bQ4114.ORHeadnuc
HP1bQ4114.ORHeadnuc
GEO: GSM1085879
GEO: GSM1085880
GEO: GSM1085881
GEO: GSM1085882


8 files Download data files
modENCODE_3792

 PCL Q3412.Kc PCL Q3412 [ALL]
target: Polycomblike
 Kc167 [ALL]
embargo expired
? BindingSite: 1385   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 11   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: PCLQ3412.Kc
PCLQ3412.Kc
GEO: GSM812236
GEO: GSM812237
GEO: GSM812238
GEO: GSM812239


8 files Download data files
modENCODE_3794

 POF (MO 459).D.mel 3rd Instar Larvae Nuclei POF Mutant 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 POF D119 mutant [ALL]
embargo expired
? BindingSite: 343   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 24   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459_L3nucPOFMutant
POF_MO459_L3nucPOFMutant
GEO: GSM1085901
GEO: GSM1085902
GEO: GSM1085903
GEO: GSM1085904


8 files Download data files
modENCODE_3793

 POF (MO 459).D.mel 3rd Instar Larvae Nuclei EGG Mutant 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
 EGG 10.1-1a mutant [ALL]
embargo expired
? BindingSite: 403   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 22   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459_L3nucEGGMutant
POF_MO459_L3nucEGGMutant
GEO: GSM1085896
GEO: GSM1085897
GEO: GSM1085898
GEO: GSM1085899
GEO: GSM1085900


10 files Download data files
modENCODE_3790

 NURF301 Q2602.Kc NURF301_Q2602 [ALL]
target: Enhancer of bithorax
 Kc167 [ALL]
embargo expired
? BindingSite: 3426   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2284   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: NURF301_Q2602.Kc
NURF301_Q2602.Kc
GEO: GSM812228
GEO: GSM812229
GEO: GSM812230
GEO: GSM812231


8 files Download data files
modENCODE_3791

 Pc.Kc Pc [ALL]
target: Polycomb
 Kc167 [ALL]
embargo expired
? BindingSite: 2149   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 331   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Pc.Kc
Pc.Kc
GEO: GSM812232
GEO: GSM812233
GEO: GSM812234
GEO: GSM812235


8 files Download data files
modENCODE_3789

 mod2.2-VC.Kc mod2.2-VC [ALL]
target: modifier of mdg4
 Kc167 [ALL]
embargo expired
? BindingSite: 1515   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 19   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: mod2.2-VC.Kc
mod2.2-VC.Kc
GEO: GSM812224
GEO: GSM812225
GEO: GSM812226
GEO: GSM812227


8 files Download data files
modENCODE_3786

 LSD1 Q3430.Kc LSD1_Q3430 [ALL]
target: Suppressor of variegation 3-3
 Kc167 [ALL]
embargo expired
? BindingSite: 4783   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 800   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: LSD1_Q3430.Kc
LSD1_Q3430.Kc
GEO: GSM812212
GEO: GSM812213
GEO: GSM812214
GEO: GSM812215


8 files Download data files
modENCODE_3788

 MLE Q4143.S2 MLE_Q4143 [ALL]
target: maleless
 S2-DRSC [ALL]
embargo expired
? BindingSite: 2266   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 140   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MLE_Q4143.S2
MLE_Q4143.S2
GEO: GSM812220
GEO: GSM812221
GEO: GSM812222
GEO: GSM812223


8 files Download data files
modENCODE_5616

 RNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei HP1b mutant 3rd Instar Larvae [ALL]
RNA Pol II (abcam) [ALL]
target: RNA polymerase II 215kD subunit
 Hp1b^16 [ALL]
embargo expired
? BindingSite: 6737   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3174   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096901
GEO: GSM1096902
GEO: GSM1096903
GEO: GSM1096904


8 files Download data files
modENCODE_3060

 Su(var)3-7-Q3448.Kc Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
 Kc167 [ALL]
embargo expired
? BindingSite: 3458   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5928   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7-Q3448.Kc
Su_var_3-7-Q3448.Kc
GEO: GSM686604
GEO: GSM686605
GEO: GSM686606
GEO: GSM686607


8 files Download data files
modENCODE_3061

 Su(var)3-9-Q2598.S2 Su(var)3-9-Q2598 [ALL]
target: Suppressor of variegation 3-9
 S2-DRSC [ALL]
embargo expired
? BindingSite: 912   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 73   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-9-Q2598.S2
Su_var_3-9-Q2598.S2
GEO: GSM686782
GEO: GSM686783
GEO: GSM686784
GEO: GSM686785


8 files Download data files
modENCODE_6075

 HP1 wa191.D.mel 3rd Instar Larvae Nuclei HP1c Mutant 3rd Instar Larvae [ALL]
HP1 wa191 [ALL]
target: Suppressor of variegation 205
 HP1c[f04929] [ALL]
embargo expired
? BindingSite: 1638   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 448   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1093494
GEO: GSM1093495
GEO: GSM1093496
GEO: GSM1093497


8 files Download data files
modENCODE_3062

 WDS Q2691.Kc WDS_Q2691 [ALL]
target: will die slowly
 Kc167 [ALL]
embargo expired
? BindingSite: 2695   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 11   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: WDS_Q2691.Kc
WDS_Q2691.Kc
GEO: GSM686610
GEO: GSM686611
GEO: GSM686612
GEO: GSM686613


8 files Download data files
modENCODE_3064

 ZW5.BG3 ZW5 [ALL]
target: deformed wings
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1207   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 8   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ZW5.BG3
ZW5.BG3


8 files Download data files
modENCODE_3052

 POF (MO 459).BG3 POF (MO 459) [ALL]
target: Painting of fourth
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 468   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 376   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459.BG3
POF_MO459.BG3
GEO: GSM686762
GEO: GSM686763
GEO: GSM686764
GEO: GSM686765


8 files Download data files
modENCODE_3054

 PR-Set7 Q3484.S2 PR-Set7_Q3484 [ALL]
target: pr-set7
 S2-DRSC [ALL]
embargo expired
? BindingSite: 4105   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 161   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: PR-Set7_Q3484.S2
PR-Set7_Q3484.S2
GEO: GSM686773
GEO: GSM686775
GEO: GSM686776
GEO: GSM686780


8 files Download data files
modENCODE_3055

 Psc.BG3 Psc [ALL]
target: Posterior sex combs
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 747   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 55   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Psc.BG3
Psc.BG3


8 files Download data files
modENCODE_3057

 RPD3-Q3451.S2 RPD3-Q3451 [ALL]
target: Rpd3
 S2-DRSC [ALL]
embargo expired
? BindingSite: 3475   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 734   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: RPD3-Q3451.S2
RPD3-Q3451.S2
GEO: GSM686600
GEO: GSM686601
GEO: GSM686602
GEO: GSM686603


8 files Download data files
modENCODE_3056

 Psc.S2 Psc [ALL]
target: Posterior sex combs
 S2-DRSC [ALL]
embargo expired
? BindingSite: 800   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 12   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Psc.S2
Psc.S2


8 files Download data files
modENCODE_3058

 SPT16 Q2583.S2 SPT16_Q2583 [ALL]
target: dre4
 S2-DRSC [ALL]
embargo expired
? BindingSite: 4141   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 708   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SPT16_Q2583.S2
SPT16_Q2583.S2


8 files Download data files
modENCODE_3047

 MRG15 Q2481.S2 MRG15_Q2481 [ALL]
target: MRG15
 S2-DRSC [ALL]
embargo expired
? BindingSite: 5768   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1400   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MRG15_Q2481.S2
MRG15_Q2481.S2


8 files Download data files
modENCODE_5065

 PR-Set7 Q3484.BG3 PR-Set7_Q3484 [ALL]
target: pr-set7
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 2207   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 18   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096781
GEO: GSM1096782
GEO: GSM1096783
GEO: GSM1096784


8 files Download data files
modENCODE_3048

 Nurf301 Q4159.S2 Nurf301_Q4159 [ALL]
target: Enhancer of bithorax
 S2-DRSC [ALL]
embargo expired
? BindingSite: 5533   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1068   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Nurf301_Q4159.S2
Nurf301_Q4159.S2
GEO: GSM686757
GEO: GSM686758
GEO: GSM686759
GEO: GSM686760


8 files Download data files
modENCODE_5066

 SU(HW)-HB.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
SU(HW)-HB [ALL]
target: suppressor of Hairy wing
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 3719   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 410   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096785
GEO: GSM1096786
GEO: GSM1096787
GEO: GSM1096788


8 files Download data files
modENCODE_5067

 WDS Q2691.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
WDS_Q2691 [ALL]
target: will die slowly
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 2622   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 311   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096789
GEO: GSM1096790
GEO: GSM1096791
GEO: GSM1096792


8 files Download data files
modENCODE_3046

 MRG15 Q2481.Kc MRG15_Q2481 [ALL]
target: MRG15
 Kc167 [ALL]
embargo expired
? BindingSite: 5211   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 573   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MRG15_Q2481.Kc
MRG15_Q2481.Kc


8 files Download data files
modENCODE_3049

 PCL Q3412.S2 PCL Q3412 [ALL]
target: Polycomblike
 S2-DRSC [ALL]
embargo expired
? BindingSite: 1188   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 99   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: PCLQ3412.S2
PCLQ3412.S2
GEO: GSM686591
GEO: GSM686592
GEO: GSM686593
GEO: GSM686594


8 files Download data files
modENCODE_5063

 NURF301 Q2602.BG3 NURF301_Q2602 [ALL]
target: Enhancer of bithorax
 ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1896   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 63   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096771
GEO: GSM1096772
GEO: GSM1096773
GEO: GSM1096774


8 files Download data files
modENCODE_5064

 Pc.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
Pc [ALL]
target: Polycomb
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1341   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 66   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_POLYCOMB_OR
KARPEN_CHIPCHIP_POLYCOMB_OR
GEO: GSM1096775
GEO: GSM1096776
GEO: GSM1096777
GEO: GSM1096778
GEO: GSM1096779
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3745

 BEAF-HB.Kc BEAF-HB [ALL]
target: Boundary element-associated factor of 32kD
 Kc167 [ALL]
embargo expired
? BindingSite: 3197   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 49   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: BEAF-HB.Kc
BEAF-HB.Kc
GEO: GSM812098
GEO: GSM812099
GEO: GSM812100
GEO: GSM812101


8 files Download data files
modENCODE_3744

 ASH1 Q4177.Kc ASH1 Q4177 [ALL]
target: absent, small, or homeotic discs 1
 Kc167 [ALL]
embargo expired
? BindingSite: 558   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 9   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: ASH1Q4177.Kc
ASH1Q4177.Kc
GEO: GSM812094
GEO: GSM812095
GEO: GSM812096
GEO: GSM812097


8 files Download data files
modENCODE_3746

 Chro(Chriz)WR.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
Chro(Chriz)WR [ALL]
target: Chromator
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1029   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Chro_Chriz_WR.14-16hrORembryo
Chro_Chriz_WR.14-16hrORembryo
GEO: GSM1085831
GEO: GSM1085832
GEO: GSM1085834
GEO: GSM1085835


8 files Download data files
modENCODE_3050

 PIWI-Q2569.Clone 8 PIWI-Q2569 [ALL]
target: piwi
 CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 1174   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 388   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_REMODEL_CL8
KARPEN_CHIPCHIP_REMODEL_CL8
KARPEN_CHIPCHIP_REMODEL_CL8
KARPEN_CHIPCHIP_REMODEL_CL8


8 files Download data files
modENCODE_3748

 CP190-HB.Kc CP190-HB [ALL]
target: Centrosomal protein 190kD
 Kc167 [ALL]
embargo expired
? BindingSite: 2524   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 8   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CP190-HB.Kc
CP190-HB.Kc
GEO: GSM812107
GEO: GSM812108
GEO: GSM812109
GEO: GSM812110


8 files Download data files
modENCODE_3749

 CTCF.Kc CTCF [ALL]
target: CTCF
 Kc167 [ALL]
embargo expired
? BindingSite: 1021   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: CTCF.Kc
CTCF.Kc
GEO: GSM812111
GEO: GSM812112
GEO: GSM812113
GEO: GSM812114


8 files Download data files
modENCODE_3750

 dRING Q3200.Kc dRING Q3200 [ALL]
target: Sex combs extra
 Kc167 [ALL]
embargo expired
? BindingSite: 2105   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 8   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dRINGQ3200.Kc
dRINGQ3200.Kc
GEO: GSM812115
GEO: GSM812116
GEO: GSM812117
GEO: GSM812118


8 files Download data files
modENCODE_5057

 CTCF.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
CTCF [ALL]
target: CTCF
 Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 928   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096753
GEO: GSM1096754
GEO: GSM1096755
GEO: GSM1096756


8 files Download data files
modENCODE_3751

 dSFMBT Q2642.S2 dSFMBT Q2642 [ALL]
target: Scm-related gene containing four mbt domains
 S2-DRSC [ALL]
embargo expired
? BindingSite: 4432   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 821   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: dSFMBTQ2642.S2
dSFMBTQ2642.S2
GEO: GSM812119
GEO: GSM812120
GEO: GSM812121
GEO: GSM812122
GEO: GSM812123
...All entries in public repositories generated by this submission



14 files Download data files
modENCODE_5056

 ACF1 Q3443.S2.Affy 2 ACF1_Q3443 [ALL]
target: ATP-dependent chromatin assembly factor large subunit
 S2-DRSC [ALL]
embargo expired
? BindingSite: 3871   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 85   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096749