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Genomic Distributions of Histone Modifications in D. melanogaster by ChIP-seq

experiment: Genomic Distributions of Histone Modifications in D. melanogaster by ChIP-seq project: Chromosomal Proteins PI: Gary Karpen Labs: Gary Karpen, Mitzi Kuroda, Sarah Elgin
We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using the Illumina NGS sequencing platform. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages.

All features generated by this experiment:
Feature Export
BindingSite 1728322
This represents 1705027 unique BindingSites
TAB CSV GFF3 (for UCSC) SEQ
DepletedRegion 2 TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 78 ChIP-seq submissions for this experiment:
DCC id Name developmental stage antibody cell line strain tissue Embargoed until Features, GBrowse and Data Files
modENCODE_4953

H2AV 9751.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H2AV_9751 [ALL]
target: Histone H2A variant
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 22275   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2389.enrichment.clusters.gff3: 4664   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481343.enrichment.clusters.gff3: 7944   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2388.enrichment.clusters.gff3: 9667   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751_OR_L3_nuc
GEO: GSM1147233
GEO: GSM1147234
GEO: GSM1147235
GEO: GSM1147236


7 files Download data files
modENCODE_4952

H3K9me3 (new lot).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K9me3 (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 10608   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2263.enrichment.clusters.gff3: 3258   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481341.enrichment.clusters.gff3: 4063   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2264.enrichment.clusters.gff3: 3287   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3_new_lot_OR_L3_nuc
GEO: GSM1147229
GEO: GSM1147230
GEO: GSM1147231
GEO: GSM1147232


7 files Download data files
modENCODE_4951

H3K23ac.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K23ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 36023   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481347.enrichment.clusters.gff3: 17999   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2239.enrichment.clusters.gff3: 6267   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2240.enrichment.clusters.gff3: 11757   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K23ac_OR_L3_nuc
GEO: GSM1147225
GEO: GSM1147226
GEO: GSM1147227
GEO: GSM1147228


7 files Download data files
modENCODE_4959

H3K4me2-Active motif.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K4me2-Active motif [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 14447   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2334.enrichment.clusters.gff3: 4752   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481644.enrichment.clusters.gff3: 4994   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2335.enrichment.clusters.gff3: 4701   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me2_Active_motif_OR_L3_nuc
GEO: GSM1147241
GEO: GSM1147242
GEO: GSM1147243
GEO: GSM1147244


7 files Download data files
modENCODE_6388

'H3K36me2 W.14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K36me2_W [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 12675   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481642.enrichment.clusters.gff3: 4311   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2397.enrichment.clusters.gff3: 4231   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2396.enrichment.clusters.gff3: 4133   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me2_W_14-16_hr_OR_embryo
GEO: GSM1147547
GEO: GSM1147548
GEO: GSM1147549
GEO: GSM1147550


7 files Download data files
modENCODE_4958

H3K9me2 antibody2.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K9me2 antibody2 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 14012   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481342.enrichment.clusters.gff3: 5616   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2267.enrichment.clusters.gff3: 3667   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2268.enrichment.clusters.gff3: 4729   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2_antibody2_OR_L3_nuc
GEO: GSM1147237
GEO: GSM1147238
GEO: GSM1147239
GEO: GSM1147240


7 files Download data files
modENCODE_3955

Solexa.H3K27me3.14-16 hr OR embryo Embryo 14-16hr OR [ALL]
H3K27Me3 (Abcam2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 5224   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1957.enrichment.clusters.gff3: 1459   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400038.enrichment.clusters.gff3: 2279   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1820.enrichment.clusters.gff3: 1486   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me3_14-16_hr_OR_embryo
GEO: GSM1147113
GEO: GSM1147114
GEO: GSM1147115
GEO: GSM1147116


7 files Download data files
modENCODE_4942

H3K36me1.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K36me1 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 19561   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481647.enrichment.clusters.gff3: 8191   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2401.enrichment.clusters.gff3: 5725   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2400.enrichment.clusters.gff3: 5645   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me1_OR_L3_nuc
GEO: GSM1147193
GEO: GSM1147194
GEO: GSM1147195
GEO: GSM1147196


7 files Download data files
modENCODE_6389

H3K36me2 W.BG3.Solexa H3K36me2_W [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
BindingSite: 17549   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972709.enrichment.clusters.gff3: 6412   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2393.enrichment.clusters.gff3: 5554   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2392.enrichment.clusters.gff3: 5583   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_HISMODENZ_H3K36me2_W.BG3.Solexa
GEO: GSM1256877
GEO: GSM1256878
GEO: GSM1256879
GEO: GSM1256880


7 files Download data files
modENCODE_4941

H3K36me3 abcam.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K36me3 abcam [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 11723   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481345.enrichment.clusters.gff3: 3981   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2259.enrichment.clusters.gff3: 3785   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2260.enrichment.clusters.gff3: 3957   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me3_abcam_OR_L3_nuc
GEO: GSM1147189
GEO: GSM1147190
GEO: GSM1147191
GEO: GSM1147192


7 files Download data files
modENCODE_6390

H3K36me2 W.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K36me2_W [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 18659   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2395.enrichment.clusters.gff3: 6079   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2394.enrichment.clusters.gff3: 6162   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482251.enrichment.clusters.gff3: 6418   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me2_W_OR_Head_Nuclei
GEO: GSM1147551
GEO: GSM1147552
GEO: GSM1147553
GEO: GSM1147554


7 files Download data files
modENCODE_4950

H3K36me3.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K36me3 [ALL] /
target: H3K36me3
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13026   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1719.enrichment.clusters.gff3: 4320   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153510.enrichment.clusters.gff3: 4468   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1709.enrichment.clusters.gff3: 4238   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me3_14-16_hr_OR_embryo


7 files Download data files
modENCODE_4121

H3K4me1.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K4me1 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23221   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1958.enrichment.clusters.gff3: 7601   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400879.enrichment.clusters.gff3: 8219   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1975.enrichment.clusters.gff3: 7401   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me1_14-16_hr_OR_embryo


7 files Download data files
modENCODE_4949

H3K9ac.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K9ac [ALL] /
target: H3K9ac
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 31336   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402830.enrichment.clusters.gff3: 12183   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2208.enrichment.clusters.gff3: 10049   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2207.enrichment.clusters.gff3: 9104   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9ac_OR_Head_Nuc
GEO: GSM1147217
GEO: GSM1147218
GEO: GSM1147219
GEO: GSM1147220


7 files Download data files
modENCODE_4120

H3K27Ac.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K27Ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 20014   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1969.enrichment.clusters.gff3: 6317   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400896.enrichment.clusters.gff3: 7474   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1952.enrichment.clusters.gff3: 6223   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27Ac_14-16_hr_OR_embryo
GEO: GSM1147145
GEO: GSM1147146
GEO: GSM1147147
GEO: GSM1147148


7 files Download data files
modENCODE_4948

H4K20me1 (3rd lot).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H4K20me1 (3rd lot) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17006   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2390.enrichment.clusters.gff3: 6478   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2391.enrichment.clusters.gff3: 5210   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481599.enrichment.clusters.gff3: 5318   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPSEQ_H4_L3_OR
GEO: GSM1147213
GEO: GSM1147214
GEO: GSM1147215
GEO: GSM1147216


7 files Download data files
modENCODE_4123

H3K9me1 (new lot).14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K9me1 (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 24656   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2021.enrichment.clusters.gff3: 6062   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400892.enrichment.clusters.gff3: 13114   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2020.enrichment.clusters.gff3: 5480   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me1_new_lot_14-16_hr_OR_embryo
GEO: GSM1147157
GEO: GSM1147158
GEO: GSM1147159
GEO: GSM1147160


7 files Download data files
modENCODE_4946

H3K18Ac (new lot).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K18Ac (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 20755   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2209.enrichment.clusters.gff3: 6381   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2210.enrichment.clusters.gff3: 6249   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402825.enrichment.clusters.gff3: 8125   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K18Ac_new_lot_OR_Head_Nuc
GEO: GSM1147209
GEO: GSM1147210
GEO: GSM1147211
GEO: GSM1147212


7 files Download data files
modENCODE_4122

H3K79Me1.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K79Me1 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 15921   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1955.enrichment.clusters.gff3: 5107   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1826.enrichment.clusters.gff3: 5484   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17400885.enrichment.clusters.gff3: 5330   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me1_14-16_hr_OR_embryo
GEO: GSM1147153
GEO: GSM1147154
GEO: GSM1147155
GEO: GSM1147156


7 files Download data files
modENCODE_5073

H1.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H1 [ALL] /
target: H1
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 27256   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2398.enrichment.clusters.gff3: 3779   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2399.enrichment.clusters.gff3: 4665   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481643.enrichment.clusters.gff3: 18812   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_HISMODENZ_H1.D.mel_3rd_Instar_Larvae_Nuclei.Solexa


7 files Download data files
modENCODE_5074

H1.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H1 [ALL] /
target: H1
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 21429   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2294.enrichment.clusters.gff3: 2922   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482236.enrichment.clusters.gff3: 15736   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2293.enrichment.clusters.gff3: 2771   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H1_OR_Head_Nuc
GEO: GSM1147265
GEO: GSM1147266
GEO: GSM1147267
GEO: GSM1147268


7 files Download data files
modENCODE_5262

H4K8ac.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H4K8ac [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 21086   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482641.enrichment.clusters.gff3: 9912   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2516.enrichment.clusters.gff3: 5692   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2517.enrichment.clusters.gff3: 5482   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K8ac.L3


7 files Download data files
modENCODE_5258

H2AV 9751.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H2AV_9751 [ALL]
target: Histone H2A variant
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 21026   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2273.enrichment.clusters.gff3: 6672   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482252.enrichment.clusters.gff3: 7576   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2272.enrichment.clusters.gff3: 6778   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751_OR_Head_Nuc
GEO: GSM1147445
GEO: GSM1147446
GEO: GSM1147447
GEO: GSM1147448


7 files Download data files
modENCODE_3953

Solexa.H3K9me2 antibody2.S2 H3K9me2 antibody2 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
BindingSite: 15518   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
enriched.cluster.742.gff3: 5703   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.14517269.clusters.gff3: 5130   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
enriched.cluster.568.gff3: 4685   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPSEQ_H3_S2
GEO: GSM1147109
GEO: GSM1147110
GEO: GSM1147111
GEO: GSM1147112


7 files Download data files
modENCODE_5259

H3K9me2.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K9me2-Ab2 (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 27941   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2200.enrichment.clusters.gff3: 6264   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2380.enrichment.clusters.gff3: 10908   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482589.enrichment.clusters.gff3: 10769   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2_OR_Head_Nuc
GEO: GSM1147449
GEO: GSM1147450
GEO: GSM1147451
GEO: GSM1147452


7 files Download data files
modENCODE_5260

'H4K16ac(M).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
H4K16ac(M) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13486   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2514.enrichment.clusters.gff3: 4070   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2515.enrichment.clusters.gff3: 4164   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482640.enrichment.clusters.gff3: 5252   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16ac.M.L3
GEO: GSM1200107
GEO: GSM1200108
GEO: GSM1200109
GEO: GSM1200110


7 files Download data files
modENCODE_4960

H3K23ac.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K23ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 34853   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402387.enrichment.clusters.gff3: 16244   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2205.enrichment.clusters.gff3: 9467   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2206.enrichment.clusters.gff3: 9142   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K23ac_OR_Head_Nuc
GEO: GSM1147245
GEO: GSM1147246
GEO: GSM1147247
GEO: GSM1147248


7 files Download data files
modENCODE_5093

H3K4me1 (ab8895 new lot 2).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K4me1 (ab8895 new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 26637   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2333.enrichment.clusters.gff3: 9942   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481646.enrichment.clusters.gff3: 9518   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2332.enrichment.clusters.gff3: 7177   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me1_ab8895_new_lot_2_L3_OR_Nuc
GEO: GSM1147329
GEO: GSM1147330
GEO: GSM1147331
GEO: GSM1147332


7 files Download data files
modENCODE_5092

'H3K4me1 (ab8895 new lot 2).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K4me1 (ab8895 new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23222   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1958.enrichment.clusters.gff3: 7601   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1975.enrichment.clusters.gff3: 7401   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402828.enrichment.clusters.gff3: 8220   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me1_ab8895_new_lot_2_14-16_hr_OR_embryo
GEO: GSM1147325
GEO: GSM1147326
GEO: GSM1147327
GEO: GSM1147328


7 files Download data files
modENCODE_5097

'H3K4me3 (ab8580 lot 2).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
H3K4me3 (ab8580 lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 13028   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2336.enrichment.clusters.gff3: 4332   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481749.enrichment.clusters.gff3: 4451   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2337.enrichment.clusters.gff3: 4245   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me3.ab8580lot2.L3
GEO: GSM1200083
GEO: GSM1200084
GEO: GSM1200085
GEO: GSM1200086


7 files Download data files
modENCODE_5095

H3K4me2-Active motif.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K4me2-Active motif [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 15811   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2356.enrichment.clusters.gff3: 5127   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482403.enrichment.clusters.gff3: 5559   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2357.enrichment.clusters.gff3: 5125   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me2_Active_motif_OR_Head_Nuc
GEO: GSM1147337
GEO: GSM1147338
GEO: GSM1147339
GEO: GSM1147340


7 files Download data files
modENCODE_5094

H3K4me1 (ab8895 new lot 2).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K4me1 (ab8895 new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 25806   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2355.enrichment.clusters.gff3: 8341   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482413.enrichment.clusters.gff3: 9680   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2354.enrichment.clusters.gff3: 7785   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me1_ab8895_new_lot_2_OR_Head_Nuclei
GEO: GSM1147333
GEO: GSM1147334
GEO: GSM1147335
GEO: GSM1147336


7 files Download data files
modENCODE_5089

'H3K27me3 (Abcam lot3).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
H3K27me3 (Abcam lot3) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 9295   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2343.enrichment.clusters.gff3: 1819   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481747.enrichment.clusters.gff3: 4966   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2342.enrichment.clusters.gff3: 2510   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me3.Abcamlot3.L3
GEO: GSM1200079
GEO: GSM1200080
GEO: GSM1200081
GEO: GSM1200082


7 files Download data files
modENCODE_5578

H3K27ac (Active Motif).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K27ac (Active Motif) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 18904   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972724.enrichment.clusters.gff3: 6950   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2367.enrichment.clusters.gff3: 6056   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2366.enrichment.clusters.gff3: 5898   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27ac_Active_Motif_OR_Head_Nuc
GEO: GSM1147471
GEO: GSM1147472
GEO: GSM1147473
GEO: GSM1147474


7 files Download data files
modENCODE_5088

H3K27me2 (Ab24684).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K27me2 (Ab24684) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 47516   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2340.enrichment.clusters.gff3: 15603   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2341.enrichment.clusters.gff3: 15021   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482405.enrichment.clusters.gff3: 16892   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me2_Ab24684_L3_OR_nuc
GEO: GSM1147313
GEO: GSM1147314
GEO: GSM1147315
GEO: GSM1147316


7 files Download data files
modENCODE_5087

'H3K27me2 (Ab24684).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K27me2 (Ab24684) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 41635   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1956.enrichment.clusters.gff3: 12968   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153519.enrichment.clusters.gff3: 17184   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1974.enrichment.clusters.gff3: 11483   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me2_Ab24684_14-16_hr_OR_embryo
GEO: GSM1147309
GEO: GSM1147310
GEO: GSM1147311
GEO: GSM1147312


7 files Download data files
modENCODE_5091

H3K36me3 abcam.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K36me3 abcam [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 11840   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2302.enrichment.clusters.gff3: 3923   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482412.enrichment.clusters.gff3: 4027   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2301.enrichment.clusters.gff3: 3890   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me3_abcam_OR_Head_Nuc
GEO: GSM1147321
GEO: GSM1147322
GEO: GSM1147323
GEO: GSM1147324


7 files Download data files
modENCODE_4945

H3K79me2 (Abcam ab3594 lot 1).14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K79me2 (Abcam ab3594 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 15467   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1978.enrichment.clusters.gff3: 5061   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481350.enrichment.clusters.gff3: 5316   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1970.enrichment.clusters.gff3: 5090   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79me2_Abcam_ab3594_lot_1_14-16_hr_OR_embryo
GEO: GSM1147205
GEO: GSM1147206
GEO: GSM1147207
GEO: GSM1147208


7 files Download data files
modENCODE_5090

H3K36me1.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K36me1 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 18456   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482253.enrichment.clusters.gff3: 7567   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2290.enrichment.clusters.gff3: 5412   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2289.enrichment.clusters.gff3: 5477   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me1_OR_Head_Nuclei
GEO: GSM1147317
GEO: GSM1147318
GEO: GSM1147319
GEO: GSM1147320


7 files Download data files
modENCODE_5096

H3K4me3 (ab8580 lot 2).14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K4me3 (ab8580 lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 19769   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481352.enrichment.clusters.gff3: 5549   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1977.enrichment.clusters.gff3: 4960   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1960.enrichment.clusters.gff3: 9260   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4me3_ab8580_lot_2_14-16_hr_OR_embryo
GEO: GSM1147341
GEO: GSM1147342
GEO: GSM1147343
GEO: GSM1147344


7 files Download data files
modENCODE_5582

H3K27me2 (Ab24684).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K27me2 (Ab24684) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 36957   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2362.enrichment.clusters.gff3: 10114   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972713.enrichment.clusters.gff3: 16728   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2363.enrichment.clusters.gff3: 10115   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me2_Ab24684_OR_Head_Nuc
GEO: GSM1147479
GEO: GSM1147480
GEO: GSM1147481
GEO: GSM1147482


7 files Download data files
modENCODE_5581

H4K8ac.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H4K8ac [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 26939   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2299.enrichment.clusters.gff3: 8148   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972798.enrichment.clusters.gff3: 10651   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2300.enrichment.clusters.gff3: 8140   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K8ac_OR_Head_Nuclei
GEO: GSM1147475
GEO: GSM1147476
GEO: GSM1147477
GEO: GSM1147478


7 files Download data files
modENCODE_4196

H3K36me1.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K36me1 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 18008   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1724.enrichment.clusters.gff3: 4523   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1714.enrichment.clusters.gff3: 5434   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17401449.enrichment.clusters.gff3: 8051   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me1_14-16_hr_OR_embryo


7 files Download data files
modENCODE_5583

H3K27me3 (Abcam lot3).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K27me3 (Abcam lot3) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 25703   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972734.enrichment.clusters.gff3: 10507   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2364.enrichment.clusters.gff3: 4865   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2365.enrichment.clusters.gff3: 10331   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me3_Abcam_lot3_OR_Head_Nuc
GEO: GSM1147483
GEO: GSM1147484
GEO: GSM1147485
GEO: GSM1147486


7 files Download data files
modENCODE_5584

H3K79me1 (Abcam lot 1).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K79me1 (Abcam lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 28683   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972726.enrichment.clusters.gff3: 12943   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2369.enrichment.clusters.gff3: 8137   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2368.enrichment.clusters.gff3: 7603   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79me1_Abcam_lot_1_OR_Head_Nuc
GEO: GSM1147487
GEO: GSM1147488
GEO: GSM1147489
GEO: GSM1147490


7 files Download data files
modENCODE_5585

H3K79me2 (Abcam ab3594 lot 1).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K79me2 (Abcam ab3594 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 26612   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2371.enrichment.clusters.gff3: 10275   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972731.enrichment.clusters.gff3: 9961   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2370.enrichment.clusters.gff3: 6376   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79me2_Abcam_ab3594_lot_1_OR_Head_Nuc
GEO: GSM1147491
GEO: GSM1147492
GEO: GSM1147493
GEO: GSM1147494


7 files Download data files
modENCODE_5083

H3K23ac.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K23ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 35767   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2482.enrichment.clusters.gff3: 10281   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2483.enrichment.clusters.gff3: 7422   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482240.enrichment.clusters.gff3: 18064   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K23ac_14-16_hr_OR_embryo
GEO: GSM1147301
GEO: GSM1147302
GEO: GSM1147303
GEO: GSM1147304


7 files Download data files
modENCODE_5586

H3K79me3 (Abcam ab2621 lot 1).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 19677   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2373.enrichment.clusters.gff3: 6470   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2372.enrichment.clusters.gff3: 6264   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972725.enrichment.clusters.gff3: 6943   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79me3_Abcam_ab2621_lot_1_OR_Head_Nuc
GEO: GSM1147495
GEO: GSM1147496
GEO: GSM1147497
GEO: GSM1147498


7 files Download data files
modENCODE_5084

H3K27ac (Active Motif).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K27ac (Active Motif) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17200   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2345.enrichment.clusters.gff3: 5426   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482246.enrichment.clusters.gff3: 6273   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2344.enrichment.clusters.gff3: 5501   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27ac.ActiveMotif.L3
GEO: GSM1200071
GEO: GSM1200072
GEO: GSM1200073
GEO: GSM1200074


7 files Download data files
modENCODE_5588

H3K9acS10P (new lot).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K9acS10P (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 21760   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2202.enrichment.clusters.gff3: 6419   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18972711.enrichment.clusters.gff3: 8976   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2201.enrichment.clusters.gff3: 6365   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9acS10P_new_lot_OR_Head_Nuc
GEO: GSM1147503
GEO: GSM1147504
GEO: GSM1147505
GEO: GSM1147506


7 files Download data files
modENCODE_5086

H3K27me1 (Millipore).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K27me1 (Millipore) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 22764   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482410.enrichment.clusters.gff3: 9662   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2361.enrichment.clusters.gff3: 6601   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2360.enrichment.clusters.gff3: 6501   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me1_Millipore_OR_Head_Nuclei
GEO: GSM1147305
GEO: GSM1147306
GEO: GSM1147307
GEO: GSM1147308


7 files Download data files
modENCODE_5085

'H3K27me1 (Millipore).D.mel 3rd Instar Larvae Nuclei.Solexa' 3rd Instar Larvae [ALL]
H3K27me1 (Millipore) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 27472   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2339.enrichment.clusters.gff3: 6901   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2338.enrichment.clusters.gff3: 8209   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481748.enrichment.clusters.gff3: 12362   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K27me1.Millipore.L3
GEO: GSM1200075
GEO: GSM1200076
GEO: GSM1200077
GEO: GSM1200078


7 files Download data files
modENCODE_5589

'H3K79me3 (Abcam ab2621 lot 1).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 17334   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2548.enrichment.clusters.gff3: 5235   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.20447937.enrichment.clusters.gff3: 6159   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2547.enrichment.clusters.gff3: 5940   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79me3_Abcam_ab2621_lot_1_14-16_hr_OR_embryo
GEO: GSM1147507
GEO: GSM1147508
GEO: GSM1147509
GEO: GSM1147510


7 files Download data files
modENCODE_5077

H2B-ubiq (NRO3).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 15913   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2518.enrichment.clusters.gff3: 5135   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2519.enrichment.clusters.gff3: 5150   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482411.enrichment.clusters.gff3: 5628   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: KARPEN_CHIPCHIP_HISMODENZ_H2B-ubiq_NRO3
GEO: GSM1200067
GEO: GSM1200068
GEO: GSM1200069
GEO: GSM1200070


7 files Download data files
modENCODE_5078

H2B-ubiq (NRO3).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 17095   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2297.enrichment.clusters.gff3: 5440   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2298.enrichment.clusters.gff3: 5597   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482250.enrichment.clusters.gff3: 6058   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2B-ubiq_NRO3_OR_Head_Nuc
GEO: GSM1147281
GEO: GSM1147282
GEO: GSM1147283
GEO: GSM1147284


7 files Download data files
modENCODE_5075

H2AV 9751.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H2AV_9751 [ALL]
target: Histone H2A variant
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 20087   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1706.enrichment.clusters.gff3: 4403   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2472.enrichment.clusters.gff3: 5016   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482427.enrichment.clusters.gff3: 5905   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2473.enrichment.clusters.gff3: 4763   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751_14-16_hr_OR_embryo
GEO: GSM1147269
GEO: GSM1147270
GEO: GSM1147271
GEO: GSM1147272
GEO: GSM1147273
...All entries in public repositories generated by this submission



10 files Download data files
modENCODE_5076

'H2B-ubiq (NRO3).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 21685   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482248.enrichment.clusters.gff3: 5802   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2504.enrichment.clusters.gff3: 5218   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1708.enrichment.clusters.gff3: 5237   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2505.enrichment.clusters.gff3: 5428   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2B-ubiq_NRO3_14-16_hr_OR_embryo
GEO: GSM1147275
GEO: GSM1147276
GEO: GSM1147277
GEO: GSM1147278
GEO: GSM1147279
...All entries in public repositories generated by this submission



10 files Download data files
modENCODE_5081

H3 antibody3.OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 21863   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402385.enrichment.clusters.gff3: 16757   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2189.enrichment.clusters.gff3: 2327   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2190.enrichment.clusters.gff3: 2779   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3_antibody3_OR_Head_Nuc
GEO: GSM1147293
GEO: GSM1147294
GEO: GSM1147295
GEO: GSM1147296


7 files Download data files
modENCODE_5082

'H3K18Ac (new lot).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K18Ac (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 16816   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2489.enrichment.clusters.gff3: 4370   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2490.enrichment.clusters.gff3: 4910   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482480.enrichment.clusters.gff3: 7536   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K18Ac_new_lot_14-16_hr_OR_embryo
GEO: GSM1147297
GEO: GSM1147298
GEO: GSM1147299
GEO: GSM1147300


7 files Download data files
modENCODE_5079

H3 antibody3.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 24339   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153512.enrichment.clusters.gff3: 18424   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2036.enrichment.clusters.gff3: 3717   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2037.enrichment.clusters.gff3: 2198   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3_antibody3_14-16_hr_OR_embryo
GEO: GSM1147285
GEO: GSM1147286
GEO: GSM1147287
GEO: GSM1147288


7 files Download data files
modENCODE_5080

H3 antibody3.D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 60052   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2242.enrichment.clusters.gff3: 18635   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482255.enrichment.clusters.gff3: 23332   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2241.enrichment.clusters.gff3: 18085   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3_antibody3_OR_L3_nuc
GEO: GSM1147289
GEO: GSM1147290
GEO: GSM1147291
GEO: GSM1147292


7 files Download data files
modENCODE_4937

H4K20me1 (3rd lot).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H4K20me1 (3rd lot) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 20277   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2274.enrichment.clusters.gff3: 6426   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18481645.enrichment.clusters.gff3: 7052   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2275.enrichment.clusters.gff3: 6799   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K20me1_3rd_lot_OR_Head_Nuc
GEO: GSM1147173
GEO: GSM1147174
GEO: GSM1147175
GEO: GSM1147176


7 files Download data files
modENCODE_4938

H4K16ac(M).14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H4K16ac(M) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 12149   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.17402383.enrichment.clusters.gff3: 6550   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1710.enrichment.clusters.gff3: 3397   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
1720.enrichment.clusters.gff3: 2202   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16ac_M_14-16_hr_OR_embryo
GEO: GSM1147177
GEO: GSM1147178
GEO: GSM1147179
GEO: GSM1147180


7 files Download data files
modENCODE_4939

H3K9me3 abcam.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H3K9me3 abcam [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 10740   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153523.enrichment.clusters.gff3: 3941   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2077.enrichment.clusters.gff3: 3404   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2076.enrichment.clusters.gff3: 3395   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3_abcam_14-16_hr_OR_embryo
GEO: GSM1147181
GEO: GSM1147182
GEO: GSM1147183
GEO: GSM1147184


7 files Download data files
modENCODE_4940

'H3K9me2-Ab2 (new lot).14-16 hr OR embryo.Solexa' Embryo 14-16hr OR [ALL]
H3K9me2-Ab2 (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 11094   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2038.enrichment.clusters.gff3: 3579   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2039.enrichment.clusters.gff3: 3238   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18153509.enrichment.clusters.gff3: 4277   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2_Ab2_new_lot_14-16_hr_OR_embryo
GEO: GSM1147185
GEO: GSM1147186
GEO: GSM1147187
GEO: GSM1147188


7 files Download data files
modENCODE_5104

H3K9acS10P (new abcam lot).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K9acS10P (new abcam lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 23241   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482237.enrichment.clusters.gff3: 9878   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2245.enrichment.clusters.gff3: 6080   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2246.enrichment.clusters.gff3: 7283   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9acS10P_new_abcam_lot_L3_OR_Nuc
GEO: GSM1147353
GEO: GSM1147354
GEO: GSM1147355
GEO: GSM1147356


7 files Download data files
modENCODE_5105

H3K9me1 (new lot 2).D.mel 3rd Instar Larvae Nuclei.Solexa 3rd Instar Larvae [ALL]
H3K9me1 (new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 33888   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2383.enrichment.clusters.gff3: 11822   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482254.enrichment.clusters.gff3: 13751   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2382.enrichment.clusters.gff3: 8315   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me1_new_lot_2_L3_OR_Nuc
GEO: GSM1147357
GEO: GSM1147358
GEO: GSM1147359
GEO: GSM1147360


7 files Download data files
modENCODE_5106

H3K9me1 (new lot 2).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H3K9me1 (new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 51604   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2378.enrichment.clusters.gff3: 15405   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2379.enrichment.clusters.gff3: 14643   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482238.enrichment.clusters.gff3: 21556   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me1_new_lot_2_OR_Head_Nuc
GEO: GSM1147361
GEO: GSM1147362
GEO: GSM1147363
GEO: GSM1147364


7 files Download data files
modENCODE_5107

H4.14-16 hr OR embryo.Solexa Embryo 14-16hr OR [ALL]
H4 [ALL] /
target: H4
Oregon-R-modENCODE [ALL]
embargo expired
BindingSite: 50896   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2475.enrichment.clusters.gff3: 12952   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2474.enrichment.clusters.gff3: 15405   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
repset.18482234.enrichment.clusters.gff3: 22539   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4_14-16_hr_OR_embryo
GEO: GSM1147365
GEO: GSM1147366
GEO: GSM1147367
GEO: GSM1147368


7 files Download data files
modENCODE_5108

H4K16ac(M).OR Head Nuclei.Solexa Mixed Adults 22 days AEL [ALL]
H4K16ac(M) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
BindingSite: 14221   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2304.enrichment.clusters.gff3: 4431   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
2303.enrichment.clusters.gff3: