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Genomic Distributions of Histone Modifications

experiment: Genomic Distributions of Histone Modifications project: Chromosomal Proteins PI: Gary Karpen Labs: Gary Karpen, Mitzi Kuroda, Sarah Elgin, Vincent Pirrotta
We aim to determe the locations of 125 chromosomal proteins and histone modifications across the Drosophila melanogaster genome. The proteins and modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages.

All features generated by this experiment:
Feature Export
BindingSite ? 1134223
This represents 911080 unique BindingSites
TAB CSV GFF3 (for UCSC) SEQ
DepletedRegion 668266
This represents 562331 unique DepletedRegions
TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 269 ChIP-chip submissions for this experiment:
DCC id Name developmental stage antibody cell line strain tissue Embargoed until Features, GBrowse and Data Files
modENCODE_5145

JHDM1 Q2634.BG3.Affy 2 JHDM1_Q2634 [ALL]
target: Lysine (K)-specific demethylase 2
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 4302   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 192   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096853
GEO: GSM1096854
GEO: GSM1096855
GEO: GSM1096856


8 files Download data files
modENCODE_5144

H4K12ac.S2 H4K12ac [ALL]
target: His4:CG31611
S2-DRSC [ALL]
embargo expired
? BindingSite: 6762   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2172   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096849
GEO: GSM1096850
GEO: GSM1096851
GEO: GSM1096852


8 files Download data files
modENCODE_5143

H3K79me3 (Abcam ab2621 lot 1).S2.Affy 2 H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 4912   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 746   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096845
GEO: GSM1096846
GEO: GSM1096847
GEO: GSM1096848


8 files Download data files
modENCODE_5142

H3K79me1 (Abcam lot 1).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K79me1 (Abcam lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7807   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5975   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096841
GEO: GSM1096842
GEO: GSM1096843
GEO: GSM1096844


8 files Download data files
modENCODE_5141

H3K4me3 (ab8580 lot 2).Kc.Affy 2 H3K4me3 (ab8580 lot 2) [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 4487   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 326   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096837
GEO: GSM1096838
GEO: GSM1096839
GEO: GSM1096840


8 files Download data files
modENCODE_5140

H3K4me3 (ab8580 lot 2).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K4me3 (ab8580 lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 4906   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 461   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096833
GEO: GSM1096834
GEO: GSM1096835
GEO: GSM1096836


8 files Download data files
modENCODE_5139

H3K4me2-Abcam lot2.2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K4me2-Abcam lot2 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 5382   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 885   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096829
GEO: GSM1096830
GEO: GSM1096831
GEO: GSM1096832


8 files Download data files
modENCODE_5138

H3K4me1 (ab8895 new lot 2).Kc.Affy 2 H3K4me1 (ab8895 new lot 2) [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 8654   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7342   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096825
GEO: GSM1096826
GEO: GSM1096827
GEO: GSM1096828


8 files Download data files
modENCODE_5137

H3K4me1 (ab8895 new lot 2).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K4me1 (ab8895 new lot 2) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 6946   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3934   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096821
GEO: GSM1096822
GEO: GSM1096823
GEO: GSM1096824


8 files Download data files
modENCODE_5136

H3K27me3 (Abcam lot3).Kc.Affy 2 H3K27me3 (Abcam lot3) [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 6676   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7613   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096817
GEO: GSM1096818
GEO: GSM1096819
GEO: GSM1096820


8 files Download data files
modENCODE_5134

H1.Kc H1 [ALL] /
target: H1
Kc167 [ALL]
embargo expired
? BindingSite: 22   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 513   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096809
GEO: GSM1096810
GEO: GSM1096811
GEO: GSM1096812


8 files Download data files
modENCODE_5135

H3K27me3 (Abcam lot3).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K27me3 (Abcam lot3) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 2896   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1643   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096813
GEO: GSM1096814
GEO: GSM1096815
GEO: GSM1096816


8 files Download data files
modENCODE_5133

H1.Clone 8 H1 [ALL] /
target: H1
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 400   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2445   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H1.Clone_8
H1.Clone_8
GEO: GSM1096805
GEO: GSM1096806
GEO: GSM1096807
GEO: GSM1096808


8 files Download data files
modENCODE_331

Su(Hw)-VC.S2 Su(Hw)-VC [ALL]
target: suppressor of Hairy wing
S2-DRSC [ALL]
embargo expired
? BindingSite: 4094   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1401   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_Hw-VC.S2
Su_Hw-VC.S2


8 files Download data files
modENCODE_963


Related to: modENCODE_3365
modENCODE_3363

H3K79Me.S2 H3K79Me1 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 7169   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5420   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me.S2
H3K79Me.S2


8 files Download data files
modENCODE_967


Related to: modENCODE_3364
modENCODE_3362

H3K4me3.BG3 H3K4me3 (ab8580 lot1) [ALL] /
target: H3K4me3
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 4839   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1362   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4Me3.BG3
H3K4Me3.BG3


8 files Download data files
modENCODE_3302

H3 antibody3.BG3 H3 antibody3 [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1759   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2391   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3antibody3.BG3
H3antibody3.BG3
GEO: GSM811908
GEO: GSM811909
GEO: GSM811910
GEO: GSM811911


8 files Download data files
modENCODE_3304


Related to: modENCODE_3365
modENCODE_3363

H4.S2 H4 [ALL] /
target: H4
S2-DRSC [ALL]
embargo expired
? BindingSite: 3813   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4820   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4.S2
H4.S2
GEO: GSM811916
GEO: GSM811917
GEO: GSM811918
GEO: GSM811919


8 files Download data files
modENCODE_3303


Related to: modENCODE_3364
modENCODE_3362

H4.BG3 H4 [ALL] /
target: H4
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1133   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3710   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4.BG3
H4.BG3
GEO: GSM811912
GEO: GSM811913
GEO: GSM811914
GEO: GSM811915


8 files Download data files
modENCODE_5261

H4K20me (2nd lot).2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H4K20me1 (2nd lot) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 2572   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 831   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1108065
GEO: GSM1108066
GEO: GSM1108067
GEO: GSM1108068


8 files Download data files
modENCODE_330

SU(HW)-HB.S2 SU(HW)-HB [ALL]
target: suppressor of Hairy wing
S2-DRSC [ALL]
embargo expired
? BindingSite: 4173   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1131   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_Hw-HB.S2
Su_Hw-HB.S2


8 files Download data files
modENCODE_3301

H3 antibody2.S2 H3 antibody2 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 1900   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3077   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3Ab2.S2
H3Ab2.S2
GEO: GSM1085758
GEO: GSM1085759
GEO: GSM1085760
GEO: GSM1085762
GEO: GSM1085763
...All entries in public repositories generated by this submission



22 files Download data files
modENCODE_3300


Related to: modENCODE_3365
modENCODE_3363

H1.S2 H1 [ALL] /
target: H1
S2-DRSC [ALL]
embargo expired
? BindingSite: 360   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1974   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H1.S2
H1.S2
GEO: GSM811904
GEO: GSM811905
GEO: GSM811906
GEO: GSM811907


8 files Download data files
modENCODE_3299


Related to: modENCODE_3364
modENCODE_3362

H1.BG3 H1 [ALL] /
target: H1
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 407   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1745   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H1.BG3
H1.BG3
GEO: GSM811900
GEO: GSM811901
GEO: GSM811902
GEO: GSM811903


8 files Download data files
modENCODE_3289

H4K8ac.Kc H4K8ac [ALL]
target: His4:CG31611
Kc167 [ALL]
embargo expired
? BindingSite: 3978   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1287   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K8ac.Kc
H4K8ac.Kc
GEO: GSM811864
GEO: GSM811865
GEO: GSM811866
GEO: GSM811867


8 files Download data files
modENCODE_329

RNA pol II (ALG).S2 RNA pol II (ALG) [ALL]
target: RNA polymerase II 215kD subunit
S2-DRSC [ALL]
embargo expired
? BindingSite: 6825   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4402   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POL_II_ALG.S2
POL_II_ALG.S2


8 files Download data files
modENCODE_3286

H4K20me (2nd lot).BG3 H4K20me (2nd lot) [ALL]
target: His4:CG31611
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 3702   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 253   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K20me_2ndlot.BG3
H4K20me_2ndlot.BG3
GEO: GSM811852
GEO: GSM811853
GEO: GSM811854
GEO: GSM811855


8 files Download data files
modENCODE_3288

H4K8ac.Clone 8 H4K8ac [ALL]
target: His4:CG31611
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 4193   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1107   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K8ac.Clone_8
H4K8ac.Clone_8
GEO: GSM811860
GEO: GSM811861
GEO: GSM811862
GEO: GSM811863


8 files Download data files
modENCODE_3287

H4K20me (2nd lot).Kc H4K20me (2nd lot) [ALL]
target: His4:CG31611
Kc167 [ALL]
embargo expired
? BindingSite: 3416   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 176   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K20me_2ndlot.Kc
H4K20me_2ndlot.Kc
GEO: GSM811856
GEO: GSM811857
GEO: GSM811858
GEO: GSM811859


8 files Download data files
modENCODE_3284

H2B-ubiq (NRO3).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7168   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7593   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2B-ubiq_NRO3.D.mel3rdInstarLarvaeNuclei
H2B-ubiq_NRO3.D.mel3rdInstarLarvaeNuclei
GEO: GSM811840
GEO: GSM811841
GEO: GSM811842
GEO: GSM811843


8 files Download data files
modENCODE_3285

H4K20me (2nd lot).14-16 hr OR embryo Embryo 14-16hr OR [ALL]
H4K20me (2nd lot) [ALL]
target: His4:CG31611
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7252   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1559   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K20me_2ndlot.14-16hrORembryo
H4K20me_2ndlot.14-16hrORembryo
GEO: GSM811848
GEO: GSM811849
GEO: GSM811850
GEO: GSM811851


8 files Download data files
modENCODE_3282

H2AV 9751.Kc H2AV_9751 [ALL]
target: Histone H2A variant
Kc167 [ALL]
embargo expired
? BindingSite: 6323   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4442   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751.Kc
H2AV_9751.Kc
GEO: GSM811832
GEO: GSM811833
GEO: GSM811834
GEO: GSM811835


8 files Download data files
modENCODE_3283

H2BK5ac.S2 H2BK5ac [ALL]
target: His2B:CG33868
S2-DRSC [ALL]
embargo expired
? BindingSite: 6041   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4490   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2BK5ac.S2
H2BK5ac.S2
GEO: GSM811836
GEO: GSM811837
GEO: GSM811838
GEO: GSM811839


8 files Download data files
modENCODE_328

RNA pol II (ALG).Kc RNA pol II (ALG) [ALL]
target: RNA polymerase II 215kD subunit
Kc167 [ALL]
embargo expired
? BindingSite: 4563   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 103   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POL_II_ALG.Kc
POL_II_ALG.Kc


8 files Download data files
modENCODE_327

RNA pol II (ALG).Clone 8 RNA pol II (ALG) [ALL]
target: RNA polymerase II 215kD subunit
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 6466   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1372   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POL_II_ALG.Clone_8
POL_II_ALG.Clone_8


8 files Download data files
modENCODE_326

Pc.S2 Pc [ALL]
target: Polycomb
S2-DRSC [ALL]
embargo expired
? BindingSite: 2172   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 965   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Pc.S2
Pc.S2


8 files Download data files
modENCODE_325

Pc.BG3 Pc [ALL]
target: Polycomb
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 1441   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 366   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Pc.BG3
Pc.BG3


8 files Download data files
modENCODE_324

mod2.2-VC.BG3 mod2.2-VC [ALL]
target: modifier of mdg4
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 866   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 133   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MDG4
MDG4


8 files Download data files
modENCODE_323

HP1a wa191.S2 HP1 wa191 [ALL]
target: Suppressor of variegation 205
S2-DRSC [ALL]
embargo expired
? BindingSite: 2298   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1643   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1a_wa191.S2
HP1a_wa191.S2
GEO: GSM811301
GEO: GSM811302
GEO: GSM811303
GEO: GSM811304


8 files Download data files
modENCODE_322

H4K8ac.S2 H4K8ac [ALL]
target: His4:CG31611
S2-DRSC [ALL]
embargo expired
? BindingSite: 5997   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6736   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K8Ac.S2
H4K8Ac.S2


8 files Download data files
modENCODE_321

H4K5ac.S2 H4K5ac [ALL]
target: His4:CG31611
S2-DRSC [ALL]
embargo expired
? BindingSite: 6707   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5231   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K5Ac.S2
H4K5Ac.S2


8 files Download data files
modENCODE_320

H4K16ac(M).S2 H4K16ac(M) [ALL]
target: His4:CG31611
S2-DRSC [ALL]
embargo expired
? BindingSite: 6561   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5371   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16Ac_M.S2
H4K16Ac_M.S2


8 files Download data files
modENCODE_319


Related to: modENCODE_3365
modENCODE_3363

H4K16ac(L).S2 H4K16ac(L) [ALL]
target: His4:CG31611
S2-DRSC [ALL]
embargo expired
? BindingSite: 6901   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6830   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16Ac_L.S2
H4K16Ac_L.S2


8 files Download data files
modENCODE_318

H4K16ac(L).Kc H4K16ac(L) [ALL]
target: His4:CG31611
Kc167 [ALL]
embargo expired
? BindingSite: 5478   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 179   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16Ac_L.Kc
H4K16Ac_L.Kc


8 files Download data files
modENCODE_317

H4K16ac(L).Clone 8 H4K16ac(L) [ALL]
target: His4:CG31611
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 6907   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4583   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16Ac_L.Clone_8
H4K16Ac_L.Clone_8


8 files Download data files
modENCODE_3170


Related to: modENCODE_3365
modENCODE_3363

H3K36me1.S2 H3K36me1 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 5477   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5781   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36me1.S2
H3K36me1.S2


8 files Download data files
modENCODE_316


Related to: modENCODE_3364
modENCODE_3362

H4K16ac(L).BG3 H4K16ac(L) [ALL]
target: His4:CG31611
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 6169   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3575   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K16Ac_L.BG3
H4K16Ac_L.BG3


8 files Download data files
modENCODE_313


Related to: modENCODE_3365
modENCODE_3363

H3K9me3.S2 H3K9me3 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 3395   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3451   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9Me3.S2
H3K9Me3.S2


8 files Download data files
modENCODE_312


Related to: modENCODE_3364
modENCODE_3362

H3K9me3 (new lot).BG3 H3K9me3 (new lot) [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 4288   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5697   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9Me3_new.lot.BG3
H3K9Me3_new.lot.BG3


8 files Download data files
modENCODE_311


Related to: modENCODE_3365
modENCODE_3363

H3K9me2 antibody2.S2 H3K9me2 antibody2 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 4026   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3807   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9Me2_Ab2.S2
H3K9Me2_Ab2.S2


8 files Download data files
modENCODE_310


Related to: modENCODE_3364
modENCODE_3362

H3K9me2-Ab2 (new lot).BG3 H3K9me2-Ab2 (new lot) [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 5018   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6066   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9Me2_Ab2_new.lot.BG3
H3K9Me2_Ab2_new.lot.BG3


8 files Download data files
modENCODE_307


Related to: modENCODE_3365
modENCODE_3363

H3K79Me2.S2 H3K79Me2 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 7091   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5068   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me2.S2
H3K79Me2.S2


8 files Download data files
modENCODE_309


Related to: modENCODE_3365
modENCODE_3363

H3K9ac.S2 H3K9ac [ALL] /
target: H3K9ac
S2-DRSC [ALL]
embargo expired
? BindingSite: 6800   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4669   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9Ac.S2
H3K9Ac.S2


8 files Download data files
modENCODE_4955

H3K79me2 (Abcam ab3594 lot 1).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K79me2 (Abcam ab3594 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7192   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3570   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096737
GEO: GSM1096738
GEO: GSM1096739
GEO: GSM1096740


8 files Download data files
modENCODE_3059

Su(var)3-7-Q3448.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
Su(var)3-7-Q3448 [ALL]
target: Suppressor of variegation 3-7
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 2392   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1220   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: Su_var_3-7-Q3448.L3nuc
Su_var_3-7-Q3448.L3nuc
GEO: GSM1085754
GEO: GSM1085755
GEO: GSM1085756
GEO: GSM1085757


8 files Download data files
modENCODE_4954

H4.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H4 [ALL] /
target: H4
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1483   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1223   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1093438
GEO: GSM1093439
GEO: GSM1093440
GEO: GSM1093441


8 files Download data files
modENCODE_306


Related to: modENCODE_3364
modENCODE_3362

H3K79Me2.BG3 H3K79Me2 [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 5968   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2024   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me2.BG3
H3K79Me2.BG3


8 files Download data files
modENCODE_4956

H3K79me3 (Abcam ab2621 lot 1).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 6656   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3283   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096741
GEO: GSM1096742
GEO: GSM1096743
GEO: GSM1096744


8 files Download data files
modENCODE_4957

H3K27ac (Active Motif).2-4 hr OR embryo.Affy 2 Embryo 2-4hr OR [ALL]
H3K23ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 4814   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2003   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096745
GEO: GSM1096746
GEO: GSM1096747
GEO: GSM1096748


8 files Download data files
modENCODE_3053

POF (MO 459).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
POF (MO 459) [ALL]
target: Painting of fourth
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 308   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 117   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: POF_MO459.D.mel3rdInstarLarvaeNuclei
POF_MO459.D.mel3rdInstarLarvaeNuclei
GEO: GSM811816
GEO: GSM811817
GEO: GSM811818
GEO: GSM811819


8 files Download data files
modENCODE_957

HP1 wa191.OR Head Nuclei HP1 wa191 [ALL]
target: Suppressor of variegation 205
embargo expired
? BindingSite: 2783   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2611   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1_OR_HEADnuc
HP1_OR_HEADnuc


8 files Download data files
modENCODE_4947

H3K79me3 (Abcam ab2621 lot 1).Kc.Affy 2 H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 6170   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1453   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


8 files Download data files
modENCODE_305


Related to: modENCODE_3365
modENCODE_3363

H3K4Me3(LP).S2 H3K4Me3(LP) [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 4913   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2372   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4Me3_LP.S2
H3K4Me3_LP.S2


11 files Download data files
modENCODE_3051

PIWI-Q2569.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
PIWI-Q2569 [ALL]
target: piwi
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 3328   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 875   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: PIWI-Q2569.D.mel3rdInstarLarvaeNuclei
PIWI-Q2569.D.mel3rdInstarLarvaeNuclei


8 files Download data files
modENCODE_304


Related to: modENCODE_3365
modENCODE_3363

H3K4me1.S2 H3K4me1 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 9249   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 9002   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K4Me1.S2
H3K4Me1.S2


11 files Download data files
modENCODE_5060

H4K8ac.BG3 H4K8ac [ALL]
target: His4:CG31611
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 5608   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3894   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096761
GEO: GSM1096762
GEO: GSM1096763
GEO: GSM1096764
GEO: GSM1096765
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3041

MOF Q4145.BG3 MOF_Q4145 [ALL]
target: males absent on the first
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 5043   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 329   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: MOF_Q4145.BG3
MOF_Q4145.BG3
GEO: GSM686741
GEO: GSM686742
GEO: GSM686743
GEO: GSM686744


8 files Download data files
modENCODE_5059

H3K9me2 antibody2.OR Head Nuclei Mixed Adults 22 days AEL [ALL]
H3K9me2 antibody2 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
Heads OR [ALL]
embargo expired
? BindingSite: 5300   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4843   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1108059
GEO: GSM1108060
GEO: GSM1108061
GEO: GSM1108062
GEO: GSM1108063
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_303


Related to: modENCODE_3365
modENCODE_3363

H3K36me3.S2 H3K36me3 [ALL] /
target: H3K36me3
S2-DRSC [ALL]
embargo expired
? BindingSite: 6610   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1741   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36Me3.S2
H3K36Me3.S2


8 files Download data files
modENCODE_4197

H3K79Me3.BG3.Affy 2 H3K79Me3 [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 7001   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5521   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me3.BG3.Affy2
H3K79Me3.BG3.Affy2
GEO: GSM1086030
GEO: GSM1086031
GEO: GSM1086032
GEO: GSM1086033
GEO: GSM1086034
...All entries in public repositories generated by this submission



11 files Download data files
modENCODE_3023

HP1c (MO 462).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
HP1c (MO 462) [ALL]
target: Heterochromatin Protein 1c
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 4755   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2260   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1c_MO462.D.mel3rdInstarLarvaeNuclei
HP1c_MO462.D.mel3rdInstarLarvaeNuclei
GEO: GSM811796
GEO: GSM811797
GEO: GSM811798
GEO: GSM811799


8 files Download data files
modENCODE_4179

H3 antibody3.Kc H3 antibody3 [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 1345   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2140   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3Ab3.Kc
H3Ab3.Kc
GEO: GSM1085996
GEO: GSM1085997
GEO: GSM1085998
GEO: GSM1085999


8 files Download data files
modENCODE_4178

H3 antibody3.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1191   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2564   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096705
GEO: GSM1096706
GEO: GSM1096707
GEO: GSM1096708


8 files Download data files
modENCODE_4177

H3 antibody3.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 71   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 720   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096701
GEO: GSM1096702
GEO: GSM1096703
GEO: GSM1096704


8 files Download data files
modENCODE_4182

H3K9me1 (Diagenode).S2 H3K9me1 (Diagenode) [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 5666   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5756   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me1_Diagenode_S2
H3K9me1_Diagenode_S2
GEO: GSM1086000
GEO: GSM1086001
GEO: GSM1086002
GEO: GSM1086003
GEO: GSM1086004
...All entries in public repositories generated by this submission



14 files Download data files
modENCODE_4181

H3K23ac.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H3K23ac [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 562   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 975   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1093429
GEO: GSM1093430
GEO: GSM1093431
GEO: GSM1093432
GEO: GSM1093433


10 files Download data files
modENCODE_3028

HP2 (Ab2-90).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
HP2 (Ab2-90) [ALL]
target: Su(var)2-HP2
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 1707   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 598   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP2_Ab2-90.D.mel3rdInstarLarvaeNuclei
HP2_Ab2-90.D.mel3rdInstarLarvaeNuclei
GEO: GSM811808
GEO: GSM811809
GEO: GSM811810
GEO: GSM811811


8 files Download data files
modENCODE_4180

H3 antibody3.OR Head Nuclei Mixed Adults 22 days AEL [ALL]
H3 antibody3 [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 6   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 86   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096709
GEO: GSM1096710
GEO: GSM1096711
GEO: GSM1096712


8 files Download data files
modENCODE_4183

H3K9me3 clone 6F12-H4.S2 H3K9me3 clone 6F12-H4 [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 1262   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 909   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3clone6F12-H4.S2
H3K9me3clone6F12-H4.S2
GEO: GSM1086008
GEO: GSM1086009
GEO: GSM1086010
GEO: GSM1086011


8 files Download data files
modENCODE_4934

H3K79me3 (Abcam ab2621 lot 1).BG3.Affy 2 H3K79me3 (Abcam ab2621 lot 1) [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 7069   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 5965   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096729
GEO: GSM1096730
GEO: GSM1096731
GEO: GSM1096732


8 files Download data files
modENCODE_3014

H4K20me.S2 H4K20me [ALL] /
target: H4K20me
S2-DRSC [ALL]
embargo expired
? BindingSite: 4796   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4647   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H4K20me.S2
H4K20me.S2
GEO: GSM686522
GEO: GSM686523
GEO: GSM686524
GEO: GSM686525


8 files Download data files
modENCODE_4935

H3K4me2-Abcam.Kc H3K4me2-Abcam [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 5839   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 941   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1096733
GEO: GSM1096734
GEO: GSM1096735
GEO: GSM1096736


8 files Download data files
modENCODE_3013

H3K9me3 abcam.Kc H3K9me3 abcam [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 2181   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3043   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3abcam.Kc
H3K9me3abcam.Kc
GEO: GSM686711
GEO: GSM686712
GEO: GSM686713
GEO: GSM686714


8 files Download data files
modENCODE_3012

H3K9me3 abcam.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H3K9me3 abcam [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 2011   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 990   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3abcam.2-4hrORembryo
H3K9me3abcam.2-4hrORembryo
GEO: GSM811779
GEO: GSM811780
GEO: GSM811781
GEO: GSM811782


8 files Download data files
modENCODE_302

H3K36me3.Kc H3K36me3 [ALL] /
target: H3K36me3
Kc167 [ALL]
embargo expired
? BindingSite: 5458   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 183   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36Me3.Kc
H3K36Me3.Kc


8 files Download data files
modENCODE_3018

HP1b (Henikoff).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
HP1b (Henikoff) [ALL]
target: Heterochromatin Protein 1b
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 3235   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 847   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HP1b_Henikoff_L3nuc
HP1b_Henikoff_L3nuc
GEO: GSM1085750
GEO: GSM1085751
GEO: GSM1085752
GEO: GSM1085753


8 files Download data files
modENCODE_3008

H3K9acS10P (new abcam lot).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
H3K9acS10P (new abcam lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 3699   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3274   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9acS10P_newabcamlot.D.mel3rdInstarLarvaeNuclei
H3K9acS10P_newabcamlot.D.mel3rdInstarLarvaeNuclei


8 files Download data files
modENCODE_3007

H3K9ac.Kc H3K9ac [ALL] /
target: H3K9ac
Kc167 [ALL]
embargo expired
? BindingSite: 6749   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4145   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9ac.Kc
H3K9ac.Kc
GEO: GSM686707
GEO: GSM686708
GEO: GSM686709
GEO: GSM686710


8 files Download data files
modENCODE_4198

H3K9me2-Ab2 (new lot 3).D.mel 3rd Instar Larvae Nuclei piwi2 mutant.Affy 2 3rd Instar Larvae [ALL]
H3K9me2-Ab2 (new lot 3) [ALL]
target: His3:CG33803
piwi2 [ALL]
embargo expired
? BindingSite: 3337   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 176   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2-Ab2_newlot3_L3nucpiwi2mutant.Affy2
H3K9me2-Ab2_newlot3_L3nucpiwi2mutant.Affy2
GEO: GSM1086036
GEO: GSM1086037
GEO: GSM1086038
GEO: GSM1086039


8 files Download data files
modENCODE_3006

H3K9ac.D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
H3K9ac [ALL] /
target: H3K9ac
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 4014   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1577   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9ac.D.mel3rdInstarLarvaeNuclei
H3K9ac.D.mel3rdInstarLarvaeNuclei
GEO: GSM811775
GEO: GSM811776
GEO: GSM811777
GEO: GSM811778


8 files Download data files
modENCODE_3005


Related to: modENCODE_3364
modENCODE_3362

H3K79Me1.BG3 H3K79Me1 [ALL]
target: His3:CG33803
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 6567   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 3305   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K79Me1.BG3
H3K79Me1.BG3
GEO: GSM811771
GEO: GSM811772
GEO: GSM811773
GEO: GSM811774


8 files Download data files
modENCODE_4201

H3K9me2-Ab2 (new lot).D.mel 3rd Instar Larvae Nuclei POF Mutant 3rd Instar Larvae [ALL]
H3K9me2-Ab2 (new lot) [ALL]
target: His3:CG33803
POF D119 mutant [ALL]
embargo expired
? BindingSite: 2517   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 1146   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2-Ab2_newlot_L3nucPOFMutant
H3K9me2-Ab2_newlot_L3nucPOFMutant
GEO: GSM1086040
GEO: GSM1086041
GEO: GSM1086042
GEO: GSM1086043


8 files Download data files
modENCODE_3011

H3K9me2-Ab2 (new lot).S2 H3K9me2-Ab2 (new lot) [ALL]
target: His3:CG33803
S2-DRSC [ALL]
embargo expired
? BindingSite: 4318   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6263   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me2-Ab2_newlot.S2
H3K9me2-Ab2_newlot.S2
GEO: GSM686516
GEO: GSM686517
GEO: GSM686518
GEO: GSM686519


8 files Download data files
modENCODE_3010

H3K9acS10P (new lot).Clone 8 H3K9acS10P (new lot) [ALL]
target: His3:CG33803
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 2156   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 286   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9acS10P_newlot.Clone_8
H3K9acS10P_newlot.Clone_8


8 files Download data files
modENCODE_4202

H3K9me3 abcam.D.mel 3rd Instar Larvae Nuclei POF Mutant 3rd Instar Larvae [ALL]
H3K9me3 abcam [ALL]
target: His3:CG33803
POF D119 mutant [ALL]
embargo expired
? BindingSite: 2331   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 950   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9me3abcam.L3nucPOFMutant
H3K9me3abcam.L3nucPOFMutant
GEO: GSM1086044
GEO: GSM1086045
GEO: GSM1086046
GEO: GSM1086047


8 files Download data files
modENCODE_301


Related to: modENCODE_3364
modENCODE_3362

H3K36me3.BG3 H3K36me3 [ALL] /
target: H3K36me3
ML-DmBG3-c2 [ALL]
embargo expired
? BindingSite: 6081   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 92   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K36Me3.BG3
H3K36Me3.BG3


8 files Download data files
modENCODE_3009

H3K9acS10P (new abcam lot).Kc H3K9acS10P (new abcam lot) [ALL]
target: His3:CG33803
Kc167 [ALL]
embargo expired
? BindingSite: 4301   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 2871   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H3K9acS10P_newabcamlot.Kc
H3K9acS10P_newabcamlot.Kc


8 files Download data files
modENCODE_2990

H2AV 9751.2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H2AV_9751 [ALL]
target: Histone H2A variant
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 5663   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 4023   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751.2-4hrORembryo
H2AV_9751.2-4hrORembryo
GEO: GSM811309
GEO: GSM811310
GEO: GSM811311
GEO: GSM811312


8 files Download data files
modENCODE_2991

H2AV 9751.S2 H2AV_9751 [ALL]
target: Histone H2A variant
S2-DRSC [ALL]
embargo expired
? BindingSite: 6378   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6098   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2AV_9751.S2
H2AV_9751.S2
GEO: GSM686484
GEO: GSM686485
GEO: GSM686486
GEO: GSM686487


8 files Download data files
modENCODE_2992

H2B-ubiq (NRO3).14-16 hr OR embryo Embryo 14-16hr OR [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7366   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 7656   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2B-ubiq_NRO3.14-16hrORembryo
H2B-ubiq_NRO3.14-16hrORembryo
GEO: GSM811313
GEO: GSM811314
GEO: GSM811315


7 files Download data files
modENCODE_2993

H2B-ubiq (NRO3).2-4 hr OR embryo Embryo 2-4hr OR [ALL]
H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 7855   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 10089   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: H2B-ubiq_NRO3.2-4hrORembryo
H2B-ubiq_NRO3.2-4hrORembryo
GEO: GSM811316
GEO: GSM811317
GEO: GSM811318
GEO: GSM811319


8 files Download data files
modENCODE_2994

H2B-ubiq (NRO3).Clone 8 H2B-ubiq (NRO3) [ALL]
target: His2B:CG33868
CME W1 Cl.8+ [ALL]
embargo expired
? BindingSite: 7254   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
DepletedRegion: 6724   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: NRO3.Clone_8
NRO3.Clone_8
GEO: GSM686488
GEO: GSM686489
GEO: GSM686490
GEO: GSM686491


8 files Download data files
modENCODE_2995

H3K18Ac (new lot).D.mel 3rd Instar Larvae Nuclei 3rd Instar Larvae [ALL]
H3K18Ac (new lot) [ALL]
target: His3:CG33803
Oregon-R-modENCODE [ALL]
embargo expired
? BindingSite: 6513   export: TAB