The table data can be sorted according to the content of a given column, just click on the column header.
|
experiment: Digital DNase I-seq to map regions of Chromatin Accessibility in D. melanogaster | project: Chromosomal Proteins | PI: Gary Karpen | Labs: Gary Karpen |
| Limited DNase I digestion of isolated nuclei was used to probe and map accessible regions of the fly genome. The resulting purified fragments were sequenced using an Illumina NGS Platform, and the short sequence reads were aligned to the reference genome. Clusters of aligned sequence tags were used to define both highly accessible regions of the genome as well as DNase I hypersensitive sites (DHSs). | ||||
| DCC id | Name | cell line | Embargoed until | Features, GBrowse and Data Files | |
|---|---|---|---|---|---|
|
modENCODE_3324
|
DNase I Hypersensitive Sites.S2 |
S2-DRSC
[ALL]
|
embargo expired |
GEO:
TMPID:GEO:3324_lane_1
GEO: TMPID:GEO:3324_lane_2 GEO: TMPID:GEO:3324_lane_3 2 files Download data files |
|
|
modENCODE_3325
|
DNase I Hypersensitive Sites.Kc |
Kc167
[ALL]
|
embargo expired |
GEO:
TMPID:GEO:3325_lane_1
GEO: TMPID:GEO:3325_lane_2 GEO: TMPID:GEO:3325_lane_3 2 files Download data files |
|
|
modENCODE_3323
|
DNase I Hypersensitive Sites.BG3 |
ML-DmBG3-c2
[ALL]
|
embargo expired |
GEO:
TMPID:GEO:3323_lane_1
GEO: TMPID:GEO:3323_lane_2 2 files Download data files |
