A data warehouse for the modENCODE project
The table data can be sorted according to the content of a given column, just click on the column header.
|experiment: Digital DNase I-seq to map regions of Chromatin Accessibility in D. melanogaster||project: Chromosomal Proteins||PI: Gary Karpen||Labs: Gary Karpen|
|Limited DNase I digestion of isolated nuclei was used to probe and map accessible regions of the fly genome. The resulting purified fragments were sequenced using an Illumina NGS Platform, and the short sequence reads were aligned to the reference genome. Clusters of aligned sequence tags were used to define both highly accessible regions of the genome as well as DNase I hypersensitive sites (DHSs).|
|DCC id||Name||cell line||Embargoed until||Features, GBrowse and Data Files|
|DNase I Hypersensitive Sites.S2||
|DNase I Hypersensitive Sites.Kc||
|DNase I Hypersensitive Sites.BG3||