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Chromatin ChIP-seq of non-Histone Chromosomal Proteins in C. elegans

experiment: Chromatin ChIP-seq of non-Histone Chromosomal Proteins in C. elegans project: Chromatin Function PI: Jason Lieb Labs: Abby Dernburg, Arshad Desai, Jason Lieb, Julie Ahringer, Susan Strome
The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expression, induce repression of the X chromosome, guide mitotic segregation and genome duplication, govern homolog pairing and recombination during meiosis, and organize chromosome positioning within the nucleus. Our 126 strategically selected targets include RNA polymerase II isoforms, dosage-compensation proteins, centromere components, homolog-pairing facilitators, recombination markers, and nuclear-envelope constituents. We will integrate information generated with existing knowledge on the biology of the targets and perform ChIP-seq analysis on mutant and RNAi extracts lacking selected target proteins.

All features generated by this experiment:
Feature Export
BindingSite 1090972
This represents 1083321 unique BindingSites
TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All 69 tracks I II III IV V X
All entries in public repositories generated by this experiment
There are 75 ChIP-seq submissions for this experiment:
DCC id Name developmental stage antibody strain temperature Embargoed until Features, GBrowse and Data Files
modENCODE_6341

seq-SDQ3927 MRG1 N2 Eemb Early Stage Embryos [ALL]
SDQ3927-MRG1 [ALL] / mrg-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 20517   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
TE004_peaks.GFF3: 3158   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC238_peaks.GFF3: 2876   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3927_MRG1_N2_Eemb_peaks.GFF3: 14483   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3927_MRG1_N2_EEMB
GEO: GSM1217533
GEO: GSM1217534
GEO: GSM1217535
GEO: GSM1217536


11 files Download data files
modENCODE_6344

seq-ab817 8WG16 639746 N2 Eemb Early Stage Embryos [ALL]
ABAB817_8WG16:346588 [ALL] / ama-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 28368   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
tTE10C_peaks.GFF3: 4343   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-ab817_8WG16_639746_N2_Eemb_peaks.GFF3: 18440   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC239_ab817_PolII_639746_Eemb18A_mBC046_M6_trimmed_peaks.GFF3: 5585   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: AB817_8WG16_639746_N2_EEMB
GEO: GSM1217537
GEO: GSM1217538
GEO: GSM1217539
GEO: GSM1217540


11 files Download data files
modENCODE_5186

seq-SDQ0812 COH1 FEM2 AD Germline containing young adult [ALL]
COH-1_SDQ0812 [ALL] / coh-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 16567   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC299_peaks.GFF3: 2964   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ0812_COH-1_csr1_peaks.GFF3: 2302   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ0812_COH1_FEM2_AD_peaks.GFF3: 11301   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0812_COH1_FEM2_AD
GEO: GSM1206392
GEO: GSM1206393
GEO: GSM1206394
GEO: GSM1206395


11 files Download data files
modENCODE_6007

seq-SDQ4625 T09A5.8 FEM2 AD Germline containing young adult [ALL]
T09A5.8_SDQ4625 [ALL] / T09A5.8
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 21608   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4625_T09A5.8_FEM2_AD_peaks.GFF3: 14075   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
T09A5.8_Q4625_5_19_sequence_peaks.GFF3: 3867   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
T09A5.8_Q4625_5_11_sequence_peaks.GFF3: 3666   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4625_T09A5.8_FEM2_AD
GEO: GSM1217397
GEO: GSM1217398
GEO: GSM1217399
GEO: GSM1217400


11 files Download data files
modENCODE_6301

seq-SDQ2382 him5 fem2 AD Germline containing young adult [ALL]
HIM-5_SDQ2382 [ALL] / him-5
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 4112   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC304_peaks.GFF3: 1015   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC292_peaks.GFF3: 904   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2382_him5_fem2_AD_peaks.GFF3: 2193   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2382_HIM5_FEM2_AD
GEO: GSM1217521
GEO: GSM1217522
GEO: GSM1217523
GEO: GSM1217524


11 files Download data files
modENCODE_6300

seq-SDQ4663 RPC1 N2 L3 L3 Larval Stage [ALL]
SDQ4663_RPC1 [ALL] /
target: RPC-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 4774   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC275_peaks.GFF3: 1452   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC058_peaks.GFF3: 1671   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6300_peaks.GFF3: 1651   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4663_RPC1_N2_L3
GEO: GSM1217517
GEO: GSM1217518
GEO: GSM1217519
GEO: GSM1217520


11 files Download data files
modENCODE_3917

seq-SDQ4501 T09A5.8 FEM2 AD Germline containing young adult [ALL]
T09A5.8_SDQ4501 [ALL] / T09A5.8
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 22873   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4501_T09A5.8_FEM2_AD_peaks.GFF3: 15063   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
T09A5.8_Q4501_5_11_sequence_peaks.GFF3: 3810   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
T09A5.8_Q4501_5_19_sequence_peaks.GFF3: 4000   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4501_T09A5.8_FEM2_AD
GEO: GSM1195391
GEO: GSM1195392
GEO: GSM1195393
GEO: GSM1195394


11 files Download data files
modENCODE_6008

seq-SDQ3898 KLE2 FEM2 AD Germline containing young adult [ALL]
CEC-1_SDQ2901 [ALL] / cec-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 16813   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3898_KLE2_FEM2_AD_peaks.GFF3: 9214   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3898_KLE-2_csr6_peaks.GFF3: 6421   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3898_KLE-2_csr5_peaks.GFF3: 1178   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3898_KLE2_FEM2_AD
GEO: GSM1206410
GEO: GSM1206411
GEO: GSM1206412
GEO: GSM1206413


10 files Download data files
modENCODE_6329

seq-SDQ3838 T26A5.5 N2 Eemb Early Stage Embryos [ALL]
T26A5.5_SDQ3867 [ALL] / T26A5.5
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 23113   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3838_T26A5.5_N2_Eemb_peaks.GFF3: 12350   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3838_T26A5.5_N2_Eemb_r1_peaks.GFF3: 4200   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3838_T26A5.5_N2_Eemb_r2_peaks.GFF3: 6563   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3838_T26A5.5_N2_EEMB
GEO: GSM1217529
GEO: GSM1217530
GEO: GSM1217531
GEO: GSM1217532


11 files Download data files
modENCODE_3923

seq-SDQ0811 RAD51 FEM2 AD Germline containing young adult [ALL]
SDQ0811-RAD51 [ALL] / rad-51
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 2827   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ0811_RAD51_chip_rep2_peaks.GFF3: 634   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ0811_RAD51_chip_rep1_peaks.GFF3: 498   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ0811_RAD51_FEM2_AD_peaks.GFF3: 1695   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0811_RAD51_FEM2_AD
GEO: GSM1217239
GEO: GSM1217240
GEO: GSM1217241
GEO: GSM1217242


11 files Download data files
modENCODE_5190

seq-SDQ2356 MRE11 FEM2 AD Germline containing young adult [ALL]
SDQ2356-MRE11 [ALL] / mre-11
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 6485   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2356_MRE11_csr6_peaks.GFF3: 2471   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2356_MRE11_FEM2_AD_peaks.GFF3: 2720   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2356_MRE-11_csr5_peaks.GFF3: 1294   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2356_MRE11_FEM2_AD
GEO: GSM1217277
GEO: GSM1217278
GEO: GSM1217279
GEO: GSM1217280


11 files Download data files
modENCODE_5980

seq-HM4077 LIN61 N2 L3 L3 Larval Stage [ALL]
LIN-61_HM4077 [ALL] / lin-61
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 38106   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
HM4077_LIN61_L3_ME11_peaks.GFF3: 9958   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
LIN61.HM4077_L3_peaks.GFF3: 14662   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
HM4077_LIN61_L3_ME17_peaks.GFF3: 13486   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: HM4077_LIN61_N2_L3
GEO: GSM1217377
GEO: GSM1217378
GEO: GSM1217379
GEO: GSM1217380


11 files Download data files
modENCODE_6297

seq-SDQ4640 SWD3 N2 Mxemb Mixed Stage Embryos [ALL]
SWD-3_SDQ4640 [ALL] /
target: SWD-3
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 16908   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4640_SWD3_N2_MXemb_2_A_EE13_BC049_peaks.GFF3: 4580   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6297_peaks.GFF3: 9630   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4640_SWD3_N2_MXemb_1_A_EE9_BC018_peaks.GFF3: 2698   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4640_SWD3_N2_MXEMB
GEO: GSM1217513
GEO: GSM1217514
GEO: GSM1217515
GEO: GSM1217516


11 files Download data files
modENCODE_5193

seq-SDQ2366 MRE11 FEM2 AD Germline containing young adult [ALL]
MRE-11_SDQ2366 [ALL] / mre-11
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 12846   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2366_MRE-11_csr7_peaks.GFF3: 4403   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2366_MRE11_FEM2_AD_peaks.GFF3: 6864   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2366_MRE11_csr6_peaks.GFF3: 1579   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1217281
GEO: GSM1217282
GEO: GSM1217283
GEO: GSM1217284


11 files Download data files
modENCODE_5985

seq-SDQ2940 NURF1 N2 L3 L3 Larval Stage [ALL]
NURF-1_SDQ2940 [ALL] / nurf-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 28423   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
NURF1.SDQ2940_L3_peaks.GFF3: 11796   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2940_NURF1_L3_ME13_peaks.GFF3: 11771   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2940_NURF1_L3_ME11_peaks.GFF3: 4856   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2940_NURF1_N2_L3
GEO: GSM1217381
GEO: GSM1217382
GEO: GSM1217383
GEO: GSM1217384


11 files Download data files
modENCODE_5188

seq-SDQ0835 SCC1 FEM2 AD Germline containing young adult [ALL]
SCC-1_SDQ0835 [ALL] / scc-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 4534   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0835_SCC1_FEM2_AD
GEO: GSM1217275
GEO: GSM1217276


5 files Download data files
modENCODE_5986

seq-SDQ3525 NURF1 N2 L3 L3 Larval Stage [ALL]
NURF-1_SDQ3525 [ALL] / nurf-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 19189   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3525_NURF1_L3_ME17_peaks.GFF3: 5357   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
NURF1.SDQ3525_L3_peaks.GFF3: 7512   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3525_NURF1_L3_ME16_peaks.GFF3: 6320   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3525_NURF1_N2_L3
GEO: GSM1217385
GEO: GSM1217386
GEO: GSM1217387
GEO: GSM1217388


11 files Download data files
modENCODE_6282

seq-SDQ0809 COH1 fem2 AD Germline containing young adult [ALL]
COH-1_SDQ0812 [ALL] / coh-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 22066   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC281_peaks.GFF3: 2587   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ0809_COH1_fem2_AD_peaks.GFF3: 15765   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ0809_COH-1_csr1_peaks.GFF3: 3714   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0809_COH1_FEM2_AD
GEO: GSM1217497
GEO: GSM1217498
GEO: GSM1217499
GEO: GSM1217500


11 files Download data files
modENCODE_3929

seq-SDQ3166 LIN37 N2 LTemb DevStageWorm:Late Embryos:JL:1 [ALL]
BH00003_LIN37 [ALL] / lin-37
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 5952   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3166_LIN37_N2_LTemb_2_peaks.gff: 1854   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3166_LIN37_N2_LTemb_1_peaks.gff: 2166   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3166_LIN37_N2_LTemb_all_peaks.gff: 1932   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3166_LIN37_N2_LEMB
GEO: GSM1195395
GEO: GSM1195396
GEO: GSM1195397
GEO: GSM1195398


11 files Download data files
modENCODE_5987

seq-SDQ3528 NURF1 N2 L3 L3 Larval Stage [ALL]
NURF-1_SDQ3528 [ALL] / nurf-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 27067   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
NURF1.SDQ3528_L3_peaks.GFF3: 10483   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3528_NURF1_L3_ME17_peaks.GFF3: 7519   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3528_NURF1_L3_ME16_peaks.GFF3: 9065   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3528_NURF1_N2_L3
GEO: GSM1217389
GEO: GSM1217390
GEO: GSM1217391
GEO: GSM1217392


11 files Download data files
modENCODE_6283

seq-SDQ4562 SMC6 N2 Mxemb Mixed Stage Embryos [ALL]
SMC-6_SDQ4562 [ALL] / smc-6
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 6890   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4562_SMC6_N2_MXemb_1_A_EE9_BC022_peaks.GFF3: 2068   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4562_SMC6_N2_MXemb_2_A_EE13_BC042_peaks.GFF3: 1430   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6283_peaks.GFF3: 3392   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4562_SMC6_N2_MXEMB
GEO: GSM1217501
GEO: GSM1217502
GEO: GSM1217503
GEO: GSM1217504


11 files Download data files
modENCODE_5187

seq-SDQ0821 SCC1 FEM2 AD Germline containing young adult [ALL]
SCC-1_SDQ0821 [ALL] / scc-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 6780   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0821_SCC1_FEM2_AD
GEO: GSM1206396
GEO: GSM1206397


5 files Download data files
modENCODE_5189

seq-SDQ1665 1666 MRG1 FEM2 AD Germline containing young adult [ALL]
SDQ16651666-MRG1 [ALL] / mrg-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 18914   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ1665_1666_MRG1_csr1_peaks.GFF3: 3283   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ1665_1666_MRG1_FEM2_AD_peaks.GFF3: 12447   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ1665-1666_MRG-1_csr2_peaks.GFF3: 3184   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ1665_1666_MRG1_FEM2_AD
GEO: GSM1206398
GEO: GSM1206399
GEO: GSM1206400
GEO: GSM1206401


11 files Download data files
modENCODE_6285

seq-SDQ4564 DPY28 N2 Mxemb Mixed Stage Embryos [ALL]
DPY-28_SDQ4564 [ALL] / dpy-28
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 19385   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4564_DPY28_N2_MXemb_1_A_EE9_BC023_peaks.GFF3: 3274   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4564_DPY28_N2_MXemb_2_A_EE13_BC037_peaks.GFF3: 5244   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6285_peaks.GFF3: 10867   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4564_DPY28_N2_MXEMB
GEO: GSM1217505
GEO: GSM1217506
GEO: GSM1217507
GEO: GSM1217508


11 files Download data files
modENCODE_5973

seq-SDQ2354 HDA1 N2 L3 L3 Larval Stage [ALL]
HDA-1_SDQ2354 [ALL] / hda-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 35862   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2354_HDA1_L3_ME8_peaks.GFF3: 11762   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
HDA1_L3_peaks.GFF3: 14199   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2354_HDA1_L3_ME12_peaks.GFF3: 9901   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2354_HDA1_N2_L3
GEO: GSM1217365
GEO: GSM1217366
GEO: GSM1217367
GEO: GSM1217368


11 files Download data files
modENCODE_6276

seq-SDQ0802 REC8 fem2 AD Germline containing young adult [ALL]
SDQ0802-REC8 [ALL] / rec-8
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 15182   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ0802_REC8_fem2_AD_peaks.GFF3: 7834   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC278_peaks.GFF3: 2001   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC298_peaks.GFF3: 5347   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ0802_REC8_FEM2_AD
GEO: GSM1217485
GEO: GSM1217486
GEO: GSM1217487
GEO: GSM1217488


11 files Download data files
modENCODE_6281

seq-SDQ4561 DPY26 N2 Mxemb Mixed Stage Embryos [ALL]
DPY-26_SDQ4561 [ALL] / dpy-26
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 14016   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4561_DPY26_N2_Mxemb_peaks.GFF3: 9882   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4561_DPY26_N2_MXemb_1_A_EE14_BC068_peaks.GFF3: 1463   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC092_peaks.GFF3: 2671   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4561_DPY26_N2_MXEMB
GEO: GSM1217493
GEO: GSM1217494
GEO: GSM1217495
GEO: GSM1217496


11 files Download data files
modENCODE_3574

seq-SDQ2370 LIN53 N2 L3 L3 Larval Stage [ALL]
SDQ2370-LIN53 [ALL] / lin-53
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 4709   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2370_LIN53_L3_mE01_peaks.GFF3: 1948   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
LIN53.SDQ2370_L3_peaks.GFF3: 706   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2370_LIN53_L3_mE02_peaks.GFF3: 2055   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2370_LIN53_N2_L3
GEO: GSM1217231
GEO: GSM1217232
GEO: GSM1217233
GEO: GSM1217234


11 files Download data files
modENCODE_5974

seq-SDQ3861 LET418 N2 L3 L3 Larval Stage [ALL]
LET-418_SDQ3861 [ALL] / let-418
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 35144   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3861_LET418_L3_ME11_peaks.GFF3: 16140   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
LET418.SDQ3861_L3_peaks.GFF3: 9187   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3861_LET418_L3_ME12_peaks.GFF3: 9817   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3861_LET418_N2_L3
GEO: GSM1217369
GEO: GSM1217371
GEO: GSM1217372


9 files Download data files
modENCODE_6278

seq-SDQ3914 REC8 fem2 AD Germline containing young adult [ALL]
REC-8_SDQ3914 [ALL] / rec-8
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 9881   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC279_peaks.GFF3: 1962   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3914_REC8_fem2_AD_peaks.GFF3: 5893   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3914_REC8_csr3_peaks.GFF3: 2026   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3914_REC8_FEM2_AD
GEO: GSM1217489
GEO: GSM1217490
GEO: GSM1217491
GEO: GSM1217492


11 files Download data files
modENCODE_6269

seq-SDQ4496 DPY26 N2 Mxemb Mixed Stage Embryos [ALL]
DPY-26_SDQ4496 [ALL] / dpy-26
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 14996   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC093_peaks.GFF3: 3906   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4496_DPY26_N2_MXemb_1_A_EE14_BC067_peaks.GFF3: 1725   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4496_DPY26_N2_Mxemb_peaks.GFF3: 9365   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4496_DPY26_N2_MXEMB
GEO: GSM1217477
GEO: GSM1217478
GEO: GSM1217479
GEO: GSM1217480


11 files Download data files
modENCODE_6267

seq-SDQ4493 MAU2 N2 Mxemb Mixed Stage Embryos [ALL]
MAU-2_SDQ4493 [ALL] / mau-2
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3660   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4493_MAU2_N2_Mxemb_peaks.GFF3: 1018   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4493-MAU2_N2_MXemb_1_A_EE13_BC033_peaks.GFF3: 1880   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC091_peaks.GFF3: 762   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4493_MAU2_N2_MXEMB
GEO: GSM1217473
GEO: GSM1217474
GEO: GSM1217475
GEO: GSM1217476


11 files Download data files
modENCODE_5975

seq-SDQ2342 LET418 N2 L3 L3 Larval Stage [ALL]
LET-418_SDQ2342 [ALL] / let-418
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 35171   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2342_LET418_L3_ME8_peaks.GFF3: 19594   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2342_LET418_L3_ME7_peaks.GFF3: 1887   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
LET418.SDQ2342_L3_peaks.GFF3: 13690   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2342_LET418_N2_L3
GEO: GSM1217373
GEO: GSM1217374
GEO: GSM1217375
GEO: GSM1217376


11 files Download data files
modENCODE_6272

seq-G0655G0656 HTP3 fem2 AD Germline containing young adult [ALL]
HTP-3_G0655G0656 [ALL] / htp-3
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 19018   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-G0655G0656_HTP3_fem2_AD_peaks.GFF3: 11716   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC295_peaks.GFF3: 4007   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC276_peaks.GFF3: 3295   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: G0655G0656_HTP3_FEM2_AD
GEO: GSM1217481
GEO: GSM1217482
GEO: GSM1217483
GEO: GSM1217484


11 files Download data files
modENCODE_5979

seq-SDQ3520 LIN61 N2 L3 L3 Larval Stage [ALL]
LIN-61_SDQ3520 [ALL] / lin-61
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 34842   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
LIN61.SDQ3520_L3_peaks.GFF3: 13662   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3520_LIN61_L3_ME16_peaks.GFF3: 9436   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3520_LIN61_L3_ME11_peaks.GFF3: 11744   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3520_LIN61_N2_L3
GEO: GSM1195415
GEO: GSM1195416
GEO: GSM1195417
GEO: GSM1195418


11 files Download data files
modENCODE_5976

seq-SDQ2340 HPL2 N2 L3 L3 Larval Stage [ALL]
HPL-2_SDQ2340 [ALL] / hpl-2
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 60553   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2340_HPL2_L3_ME8_peaks.GFF3: 20533   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ2340_HPL2_L3_ME11_peaks.GFF3: 16490   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
HPL2_L3_peaks.GFF3: 23530   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2340_HPL2_N2_L3
GEO: GSM1206406
GEO: GSM1206407
GEO: GSM1206408
GEO: GSM1206409


11 files Download data files
modENCODE_5249

seq-SDQ2357 AMA1 ojIs9 YA germline Germline containing young adult [ALL]
SDQ2357-AMA1 [ALL] / ama-1
WH223 [ALL] / zyg-12
20 degree celsius [ALL]
embargo expired
BindingSite: 6182   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW110_peaks.GFF3: 3334   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW111_peaks.GFF3: 2848   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


10 files Download data files
modENCODE_6257

seq-SDQ4154 IMB1 N2 Mxemb Mixed Stage Embryos [ALL]
SDQ4154_IMB1 [ALL] /
target: IMB-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 5381   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
KI026_peaks.GFF3: 1620   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6257_peaks.GFF3: 2008   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC166_peaks.GFF3: 1753   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4154_IMB1_N2_MXEMB
GEO: GSM1217465
GEO: GSM1217466
GEO: GSM1217467
GEO: GSM1217468


11 files Download data files
modENCODE_5245

seq-WA30534799 H3K4me1 FEM2 AD Germline containing young adult [ALL]
WA30534799_H3K4me1 [ALL] /
target: H3K4me1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
GBrowse tracks: H3K4me1_YA_F
GEO: GSM1217349
GEO: GSM1217350
GEO: GSM1217351
GEO: GSM1217352


8 files Download data files
modENCODE_6262

seq-SDQ2357 AMA1 fem2 AD Germline containing young adult [ALL]
SDQ2357-AMA1 [ALL] / ama-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 28910   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW113_peaks.GFF3: 5651   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2357_AMA1_fem2_AD_peaks.GFF3: 17967   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW112_peaks.GFF3: 5292   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


11 files Download data files
modENCODE_6265

seq-SDQ4481 PQN85 N2 Mxemb Mixed Stage Embryos [ALL]
PQN-85_SDQ4481 [ALL] / pqn-85
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3480   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4481-PQN85_N2_MXemb_1_A_EE13_BC047_peaks.GFF3: 1789   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC072_peaks.GFF3: 676   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4481_PQN85_N2_Mxemb_peaks.GFF3: 1015   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4481_PQN85_N2_MXEMB
GEO: GSM1217469
GEO: GSM1217470
GEO: GSM1217471
GEO: GSM1217472


11 files Download data files
modENCODE_6251

seq-SDQ4109 TAF1 N2 Mxemb Mixed Stage Embryos [ALL]
TAF-1_SDQ4109 [ALL] / taf-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 6960   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4109_TAF1_N2_Mxemb_peaks.GFF3: 2987   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
FW001_01458_001_UNCCH_100422_UNC4-RDR3001561_0002_3_peaks.GFF3: 2090   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4109_TAF1_N2_MXemb_2_A_EE13_BC056_peaks.GFF3: 1883   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4109_TAF1_N2_MXEMB
GEO: GSM1217453
GEO: GSM1217454
GEO: GSM1217455
GEO: GSM1217456


11 files Download data files
modENCODE_6232

seq-SDQ3499 DPY30 N2 Mxemb Mixed Stage Embryos [ALL]
DPY-30_SDQ3499 [ALL] / dpy-30
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3802   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6232_peaks.GFF3: 2103   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC086_peaks.GFF3: 817   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC003_peaks.GFF3: 882   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3499_DPY30_N2_MXEMB
GEO: GSM1217429
GEO: GSM1217430
GEO: GSM1217431
GEO: GSM1217432


11 files Download data files
modENCODE_5230

seq-SDQ3972 COH3 FEM2 AD Germline containing young adult [ALL]
SDQ2357-AMA1 [ALL] / ama-1
WH223 [ALL] / zyg-12
20 degree celsius [ALL]
embargo expired
BindingSite: 6182   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW110_peaks.GFF3: 3334   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
CW111_peaks.GFF3: 2848   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3972_COH3_FEM2_AD
GEO: GSM1217327
GEO: GSM1217328
GEO: GSM1217329
GEO: GSM1217330


10 files Download data files
modENCODE_6230

seq-SDQ2357Q2358 AMA1 N2 Mxemb RiIMB1 Mixed Stage Embryos [ALL]
AMA-1_SDQ2358 [ALL] / ama-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 20833   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2357Q2358_AMA1_N2_Mxemb_RiIMB1_peaks.GFF3: 15152   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC218_peaks.GFF3: 2843   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC217_peaks.GFF3: 2838   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2357Q2358_AMA1_N2_MXEMB_RiIMB1
GEO: GSM1217425
GEO: GSM1217426
GEO: GSM1217427
GEO: GSM1217428


10 files Download data files
modENCODE_5227

seq-SDQ3965 ZIM1 FEM2 AD Germline containing young adult [ALL]
ZIM-1_SDQ3965 [ALL] / zim-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 17878   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3965_ZIM1_csr4_peaks.GFF3: 5552   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3965_ZIM1_csr5_peaks.GFF3: 2887   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3965_ZIM1_FEM2_AD_peaks.GFF3: 9439   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3965_ZIM1_FEM2_AD
GEO: GSM1217323
GEO: GSM1217324
GEO: GSM1217325
GEO: GSM1217326


11 files Download data files
modENCODE_5225

seq-SDQ3956 ZHP3 FEM2 AD Germline containing young adult [ALL]
ZHP-3_SDQ3956 [ALL] / zhp-3
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 24825   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3956_ZHP3_csr5_peaks.GFF3: 7001   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3956_ZHP3_FEM2_AD_peaks.GFF3: 11843   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3956_ZHP3_csr4_peaks.GFF3: 5981   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3956_ZHP3_FEM2_AD
GEO: GSM1217319
GEO: GSM1217320
GEO: GSM1217321
GEO: GSM1217322


11 files Download data files
modENCODE_6237

seq-SDQ3892 MIX1 N2 Mxemb Mixed Stage Embryos [ALL]
MIX-1_SDQ3892 [ALL] / mix-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 5721   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC073_peaks.GFF3: 706   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3892_MIX1_N2_Mxemb_peaks.GFF3: 2705   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3892_MIX1_N2_MXemb_1_A_EE13_BC030_peaks.GFF3: 2310   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3892_MIX1_N2_MXEMB
GEO: GSM1217441
GEO: GSM1217442
GEO: GSM1217443
GEO: GSM1217444


11 files Download data files
modENCODE_6234

seq-SDQ3582 CBP1 N2 Mxemb Mixed Stage Embryos [ALL]
SDQ3582_CBP1 [ALL] / cbp-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 11426   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
KI22_peaks.GFF3: 2004   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6234_peaks.GFF3: 6300   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC053_peaks.GFF3: 3122   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3582_CBP1_N2_MXEMB
GEO: GSM1217433
GEO: GSM1217434
GEO: GSM1217435
GEO: GSM1217436


11 files Download data files
modENCODE_5224

seq-SDQ3953 REC8 FEM2 AD Germline containing young adult [ALL]
REC-8_SDQ3953 [ALL] / rec-8
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 13617   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC296_peaks.GFF3: 3670   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3953_REC8_FEM2_AD_peaks.GFF3: 7283   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC280_peaks.GFF3: 2664   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3953_REC8_FEM2_AD
GEO: GSM1217315
GEO: GSM1217316
GEO: GSM1217317
GEO: GSM1217318


11 files Download data files
modENCODE_6235

seq-SDQ3856 SDC1 N2 Mxemb Mixed Stage Embryos [ALL]
SDC-1_SDQ3856 [ALL] / sdc-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3042   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC070_peaks.GFF3: 530   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC094_peaks.GFF3: 1160   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3856_SDC1_N2_Mxemb_peaks.GFF3: 1352   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3856_SDC1_N2_MXEMB
GEO: GSM1217437
GEO: GSM1217438
GEO: GSM1217439
GEO: GSM1217440


11 files Download data files
modENCODE_5223

seq-SDQ3949 ZIM3 FEM2 AD Germline containing young adult [ALL]
ZIM-3_SDQ3949 [ALL] / zim-3
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 13949   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3949_ZIM3_csr6_peaks.GFF3: 1211   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3949_ZIM3_FEM2_AD_peaks.GFF3: 6659   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3949_ZIM3_csr5_peaks.GFF3: 6079   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3949_ZIM3_FEM2_AD
GEO: GSM1217311
GEO: GSM1217312
GEO: GSM1217313
GEO: GSM1217314


11 files Download data files
modENCODE_3931

seq-SDQ2370 LIN53 N2 LTemb DevStageWorm:Late Embryos:JL:1 [ALL]
SDQ2370-LIN53 [ALL] / lin-53
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3269   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2370_LIN53_N2_LTemb_2_peaks.gff: 1001   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2370_LIN53_N2_LTemb_all_peaks.gff: 1221   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2370_LIN53_N2_LTemb_1_peaks.gff: 1047   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2370_LIN53_N2_LEMB
GEO: GSM1217243
GEO: GSM1217244
GEO: GSM1217245
GEO: GSM1217246


11 files Download data files
modENCODE_6218

seq-NBP170893 HTZ1 N2 Mxemb Mixed Stage Embryos [ALL]
HTZ-1_NBP170893 [ALL] / htz-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 15044   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC167_peaks.GFF3: 3650   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6218_peaks.GFF3: 7546   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC077_peaks.GFF3: 3848   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: NBP170893_HTZ1_N2_MXEMB
GEO: GSM1217409
GEO: GSM1217410
GEO: GSM1217411
GEO: GSM1217412


11 files Download data files
modENCODE_6213

seq-JL00006 ZFP1 N2 L3 L3 Larval Stage [ALL]
JL00006_ZFP1 [ALL] / zfp-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 23808   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-JL00006_ZFP1_N2_L3_1_A_L3E1_BC016_peaks.GFF3: 3559   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-JL00006_ZFP1_N2_L3_2_A_L3E2_BC048_peaks.GFF3: 6371   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6213_peaks.GFF3: 13878   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1217405
GEO: GSM1217406
GEO: GSM1217407
GEO: GSM1217408


11 files Download data files
modENCODE_6223

seq-SDQ0839 TBP1 N2 Mxemb EE Mixed Stage Embryos [ALL]
SDQ0839_TBP1 [ALL] /
target: TBP-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 8559   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6223_peaks.GFF3: 4214   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ0839_TBP1_N2_MXemb_2_A_EE13_BC057_peaks.GFF3: 1685   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
FW002_peaks.GFF3: 2660   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1217417
GEO: GSM1217418
GEO: GSM1217419
GEO: GSM1217420


11 files Download data files
modENCODE_6227

seq-SDQ2357Q2358 AMA1 N2 Mxemb EE Mixed Stage Embryos [ALL]
SDQ2357-AMA1 [ALL] / ama-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 25008   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6227_peaks.GFF3: 18518   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC002_peaks.GFF3: 2672   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC085_peaks.GFF3: 3818   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2357Q2358_AMA1_N2_MXEMB_EE
GEO: GSM1217421
GEO: GSM1217422
GEO: GSM1217423
GEO: GSM1217424


11 files Download data files
modENCODE_5233

seq-SDQ4068 MRG1 FEM2 AD Germline containing young adult [ALL]
MRG-1_SDQ4068 [ALL] / mrg-1
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 18811   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ4068_MRG1_FEM2_AD_peaks.GFF3: 12147   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ4068_MRG-1_csr3_peaks.GFF3: 3895   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ4068_MRG1_csr2_peaks.GFF3: 2769   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ4068_MRG1_FEM2_AD
GEO: GSM1217335
GEO: GSM1217336
GEO: GSM1217337
GEO: GSM1217338


11 files Download data files
modENCODE_6219

seq-OD0039 SMC4 N2 Mxemb Mixed Stage Embryos [ALL]
SMC-4_OD00039 [ALL] / smc-4
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 3469   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SE125_peaks.GFF3: 1176   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
6219_peaks.GFF3: 1997   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SE128_peaks.GFF3: 296   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: OD0039_SMC4_N2_MXEMB
GEO: GSM1217413
GEO: GSM1217414
GEO: GSM1217415
GEO: GSM1217416


11 files Download data files
modENCODE_5231

seq-SDQ3989 ASH2 FEM2 AD Germline containing young adult [ALL]
ASH-2_SDQ3989 [ALL] / ash-2
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 5289   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
ACD118_peaks.GFF3: 1901   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
ACD117_peaks.GFF3: 379   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3989_ASH2_FEM2_AD_peaks.GFF3: 3009   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3989_ASH2_FEM2_AD
GEO: GSM1217331
GEO: GSM1217332
GEO: GSM1217333
GEO: GSM1217334


11 files Download data files
modENCODE_6208

seq-AB46540 NIgG N2 Mxemb Mixed Stage Embryos [ALL]
AB46540_NIgG [ALL] /
target: N/A (negative control IgG)
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 1773   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-AB46540_NIgG_N2_Mxemb_peaks.GFF3: 831   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SE145_peaks.GFF3: 789   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SE142_peaks.GFF3: 153   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: AB46540_NIgG_N2_MXEMB
GEO: GSM1195431
GEO: GSM1195432
GEO: GSM1195433
GEO: GSM1195434


11 files Download data files
modENCODE_5214

seq-SDQ3907 CHD3 FEM2 AD Germline containing young adult [ALL]
CHD-3_SDQ3907 [ALL] / chd-3
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 17232   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3907_CHD3_csr3_peaks.GFF3: 1889   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3907_CHD3_FEM2_AD_peaks.GFF3: 10520   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3907_CHD-3_csr1_peaks.GFF3: 4823   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3907_CHD3_FEM2_AD
GEO: GSM1217295
GEO: GSM1217296
GEO: GSM1217297
GEO: GSM1217298


11 files Download data files
modENCODE_5208

seq-SDQ3853 MSH5 FEM2 AD Germline containing young adult [ALL]
MSH-5_SDQ3853 [ALL] / msh-5
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 5957   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3853_MSH5_FEM2_AD_peaks.GFF3: 3271   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC284_peaks.GFF3: 1066   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC302_peaks.GFF3: 1620   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3853_MSH5_FEM2_AD
GEO: GSM1217287
GEO: GSM1217288
GEO: GSM1217289
GEO: GSM1217290


11 files Download data files
modENCODE_6023

seq-SDQ2946 HCP4 N2 Mxemb Mixed Stage Embryos [ALL]
HCP-4_SDQ2946 [ALL] / hcp-4
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 1689   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ2946_HCP4_N2_Mxemb_peaks.GFF3: 672   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC191_peaks.GFF3: 569   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
BC267_peaks.GFF3: 448   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ2946_HCP4_N2_MXEMB
GEO: GSM1206414
GEO: GSM1206415
GEO: GSM1206416
GEO: GSM1206417


11 files Download data files
modENCODE_5209

seq-SDQ3866 MRE11 FEM2 AD Germline containing young adult [ALL]
MRE-11_SDQ3866 [ALL] / mre-11
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 21487   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3866_MRE-11_csr11_peaks.GFF3: 5799   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
SDQ3866_MRE11_csr9_peaks.GFF3: 4212   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-SDQ3866_MRE11_FEM2_AD_peaks.GFF3: 11476   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3866_MRE11_FEM2_AD
GEO: GSM1217291
GEO: GSM1217292
GEO: GSM1217293
GEO: GSM1217294


11 files Download data files
modENCODE_5207

seq-SDQ3849 CHD3 FEM2 AD Germline containing young adult [ALL]
CHD-3_SDQ3849 [ALL] / chd-3
DH245 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 4940   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: SDQ3849_CHD3_FEM2_AD
GEO: GSM1217285
GEO: GSM1217286


5 files Download data files
modENCODE_3569

seq-JA00001 HTZ1 N2 L3 L3 Larval Stage [ALL]
HTZ-1_JA00001 [ALL] / htz-1
N2 [ALL]
20 degree celsius [ALL]
embargo expired
BindingSite: 9223   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-JA00001_HTZ1_N2_L3_3_macs14_peaks.gff: 4940   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
seq-JA00001_HTZ1_N2_L3_catted_peaks.gff: 4283   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: JA00001_HTZ1_N2_L3
GEO: GSM1206280
GEO: GSM1206281
GEO: GSM1206282
GEO: GSM1206283


10 files Download data files
modENCODE_5222

seq-SDQ3948 COH3 FEM2 AD Germline containing young adult [ALL]
COH-3_SDQ3948 [ALL] / coh-3
DH245 [ALL]
20 degree celsius