modENCODE |  Help
Hide

The table data can be sorted according to the content of a given column, just click on the column header.

Chromatin Binding Site Mapping of Transcription Factors in D. melanogaster by ChIP-seq

experiment: Chromatin Binding Site Mapping of Transcription Factors in D. melanogaster by ChIP-seq project: Regulatory Elements in Drosophila PI: Kevin White Labs: Kevin White
The White Lab is aiming to map the association of all the Transcription Factors (TF) on the genome of Drosophila melanogaster. One technique that we use for this purpose is chromatin immunoprecipitation coupled with deep sequencing (ChIP-seq) utilizing an Illumina next generation sequencing platform. The data generated by ChIP-seq experiments consist basically of a plot of signal intensity across the genome. The highest signals correspond to positions in the genome occupied by the tested TF.

All features generated by this experiment:
Feature Export
BindingSite 247265
This represents 246893 unique BindingSites
TAB CSV GFF3 (for UCSC) SEQ
ProteinBindingSite 48466
This represents 48447 unique ProteinBindingSites
TAB CSV GFF3 (for UCSC) SEQ
All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 72 ChIP-seq submissions for this experiment:
DCC id Name developmental stage antibody cell line strain target gene Embargoed until Features, GBrowse and Data Files
modENCODE_4082

CNC AdultFemale-seq Adult Female [ALL]
KW0-CNC [ALL]
target: cap-n-collar
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1684   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4081

CNC 16-24-seq Embryo 16-24 h [ALL]
KW0-CNC [ALL]
target: cap-n-collar
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 4758   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4089

Fru 0-8-seq Embryo 0-8 h [ALL]
anti-Fru [ALL]
target: fruitless
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 5538   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5018

Su(H) Kc cells ChIP-seq Su(H) [ALL] /
target: fly_genes:Su(H)
Kc167 [ALL]
embargo expired
BindingSite: 14384   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


9 files Download data files
modENCODE_5007

dMyc S2 cells ChIP-seq MycN [ALL] /
target: fly_genes:dm
S2-DRSC [ALL]
embargo expired
BindingSite: 1355   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5006

dMyc Kc167 cells ChIP-seq MycN [ALL] /
target: fly_genes:dm
Kc167 [ALL]
embargo expired
BindingSite: 9897   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4095

Prd-RF12 0-12-seq Embryo 0-12 h [ALL]
anti-Prd RF12 [ALL]
target: paired
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1348   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5000

Hr78-GFP W3L ChIP-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Hr78-GFP [ALL]
target: Hormone-receptor-like in 78
Hr78 [ALL]
embargo expired
BindingSite: 4851   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4074

TCF 0-8h embryo ChIP-seq Embryo 0-8 h [ALL]
anti-dTCF [ALL] /
target: pangolin
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 4589   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5001

insv Kc cells ChIP-seq insv [ALL]
target: scribbler
Kc167 [ALL]
embargo expired
BindingSite: 13016   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


9 files Download data files
modENCODE_4071

scute 0-8h embryo ChIP-seq Embryo 0-8 h [ALL]
scute_guineapig_Crews [ALL]
target: scute
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1276   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5003

lola-PI-GFP W3L ChIP-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
lola-RI-GFP [ALL]
target: longitudinals lacking
lola [ALL]
embargo expired
BindingSite: 2639   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4077

broad 0-8h embryo ChIP-seq Embryo 0-8 h [ALL]
br-core [ALL] /
target: broad
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 5171   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4078

CG16778 0-8h embryo ChIP-seq Embryo 0-8 h [ALL]
anti-CG16778 [ALL]
target: jim lovell
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 4164   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4966

CG8478 S2 cells ChIP-seq KW3-CG8478-D1 [ALL] / CG8478
S2-DRSC [ALL]
embargo expired
BindingSite: 3284   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4983

H Kc cells ChIP-seq KW3-h-D1 [ALL]
target: hairy
Kc167 [ALL]
embargo expired
BindingSite: 13577   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


9 files Download data files
modENCODE_4109

Usp W3L-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
usp-GFP [ALL]
target: ultraspiracle
Hr78-GFP [ALL]
target: Hormone-receptor-like in 78
usp [ALL]
embargo expired
BindingSite: 3053   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4961

Abd-B-GFP vMock W3L ChIP-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Abd-B-GFP [ALL]
target: Abdominal B
Hr78-GFP [ALL]
target: Hormone-receptor-like in 78
Abd-B [ALL]
embargo expired
BindingSite: 2949   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


9 files Download data files
modENCODE_4080

CG8478 WPP ChIP-seq White prepupae (WPP) [ALL]
KW3-CG8478-D1 [ALL] / CG8478
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 4067   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3398

EcR WPP-4-5h White prepupae (WPP) + 4-5h [ALL]
odg-GFP [ALL] /
target: eGFP
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1743   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: EcR_WPP-4-5h
GEO: GSM628268
GEO: GSM628269
GEO: GSM628270


2 files Download data files
modENCODE_5024

TCF W3L ChIP-seq L3 stage larvae [ALL]
tgo_mouse_Crews [ALL]
target: tango
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 13745   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206892
GEO: GSM1206893
GEO: GSM1206894
GEO: GSM1206895
GEO: GSM1206896
...All entries in public repositories generated by this submission



9 files Download data files
modENCODE_4068

Su(H) 8-16h embryo ChIP-seq Embryo 8-16 h [ALL]
Su(H) [ALL] /
target: fly_genes:Su(H)
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 510   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5025

TCF WPP ChIP-seq White prepupae (WPP) [ALL]
tgo_mouse_Crews [ALL]
target: tango
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 9881   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206898
GEO: GSM1206899
GEO: GSM1206900
GEO: GSM1206901
GEO: GSM1206902
...All entries in public repositories generated by this submission



9 files Download data files
modENCODE_3396

E0-12h SuVar3-9 Embryo 0-12 h [ALL]
Su(var)3-9 [ALL]
target: Suppressor of variegation 3-9
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 3632   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E0-12h_SuVar3-9
GEO: GSM636838
GEO: GSM636839


2 files Download data files
modENCODE_5029

yki 8-16h embryonic ChIP-seq Embryo 8-16 h [ALL]
Yki91 [ALL]
target: yorkie
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 5136   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


11 files Download data files
modENCODE_3395

E0-8h D Embryo 0-8 h [ALL]
KW3-D-D2 [ALL]
target: Dichaete
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 528   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E0-8h_D
GEO: GSM570039
GEO: GSM628262


2 files Download data files
modENCODE_3399

A.Female Trem Adult Female [ALL]
anti-trem [ALL]
target: trade embargo
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1213   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: A.Female_Trem
GEO: GSM628259
GEO: GSM628260


2 files Download data files
modENCODE_5022

dTBP 0-8h embryonic ChIP-seq Embryo 0-8 h [ALL]
Tbp [ALL]
target: TATA binding protein
exd-GFP-13T [ALL]
target: extradenticle
Hr78-GFP [ALL]
target: Hormone-receptor-like in 78
embargo expired
BindingSite: 7769   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206884
GEO: GSM1206885
GEO: GSM1206886
GEO: GSM1206887


7 files Download data files
modENCODE_4069

Su(H) 16-24h embryo ChIP-seq Embryo 16-24 h [ALL]
Su(H) [ALL] /
target: fly_genes:Su(H)
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 5144   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5017

Su(H) 0-8 embryonic ChIP-seq Embryo 0-8 h [ALL]
Su(H) [ALL] /
target: fly_genes:Su(H)
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 4403   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206878
GEO: GSM1206879
GEO: GSM1206880
GEO: GSM1206881
GEO: GSM1206882
...All entries in public repositories generated by this submission



9 files Download data files
modENCODE_4070

homothorax 0-8h embryo ChIP-seq Embryo 0-8 h [ALL]
anti-Hth [ALL] /
target: fly_genes:hth
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 6207   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_5023

TCF nonISO1 0-8 embryonic ChIP-seq Embryo 0-8 h [ALL]
tgo_mouse_Crews [ALL]
target: tango
Hr46-GFP [ALL]
target: Hormone receptor-like in 46
embargo expired
BindingSite: 9485   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206888
GEO: GSM1206889
GEO: GSM1206890
GEO: GSM1206891


7 files Download data files
modENCODE_5011

Notch-GFP W3L ChIP-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Notch-GFP [ALL]
target: Notch
N [ALL]
embargo expired
BindingSite: 4198   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3401

5T 8-16 NW GFP Embryo 8-16 h [ALL]
odg-GFP [ALL] /
target: eGFP
eve-GFP-P[acman]-5T [ALL]
embargo expired
ProteinBindingSite: 3979   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: 5T_8-16_NW_GFP
GEO: GSM636830
GEO: GSM636831


2 files Download data files
modENCODE_3400

R13 E1-6h Set2 Embryo 1-6 h [ALL]
odg-GFP [ALL] /
target: eGFP
R13-eve-YFP [ALL]
embargo expired
ProteinBindingSite: 586   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: R13_E1-6h_Set2
GEO: GSM636832
GEO: GSM636833
GEO: GSM636834


2 files Download data files
modENCODE_5014

Stat92E-GFP 12-24h embryonic ChIP-seq Embryo 12-24 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Stat92E-GFP [ALL]
target: Signal-transducer and activator of transcription protein at 92E
Stat92E [ALL]
embargo expired
BindingSite: 2380   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206874
GEO: GSM1206875
GEO: GSM1206876
GEO: GSM1206877


7 files Download data files
modENCODE_5005

lola-PJ-GFP 12-24h embryo ChIP-seq Embryo 12-24 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
lola-RJ-GFP [ALL]
lola [ALL]
embargo expired
BindingSite: 2922   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206866
GEO: GSM1206867
GEO: GSM1206868
GEO: GSM1206869


7 files Download data files
modENCODE_5008

dMyc W3L ChIP-seq L3 stage larvae [ALL]
MycN [ALL] /
target: fly_genes:dm
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 8614   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206870
GEO: GSM1206871
GEO: GSM1206872
GEO: GSM1206873


7 files Download data files
modENCODE_3403

7T W3L GFP L3 stage larvae [ALL]
odg-GFP [ALL] /
target: eGFP
7T-CAD [ALL]
target: caudal
embargo expired
ProteinBindingSite: 414   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: 7T_W3L_GFP
GEO: GSM628264
GEO: GSM628265
GEO: GSM628266
GEO: GSM628267


2 files Download data files
modENCODE_5004

lola-PJ-GFP 0-12h embryo ChIP-seq Embryo 0-12 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
lola-RJ-GFP [ALL]
lola [ALL]
embargo expired
BindingSite: 5954   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206862
GEO: GSM1206863
GEO: GSM1206864
GEO: GSM1206865


7 files Download data files
modENCODE_3243

E8-16 kni Embryo 8-16 h [ALL]
KNI-D2 [ALL]
target: knirps
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 662   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E8-16_kni
GEO: GSM570045
GEO: GSM570046
GEO: GSM570047
GEO: GSM570048


2 files Download data files
modENCODE_3390

E16-24h Hr39 Embryo 16-24 h [ALL]
KW4-Hr39-D1 [ALL]
target: Hormone receptor-like in 39
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1216   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24h_Hr39
GEO: GSM628224
GEO: GSM628225


2 files Download data files
modENCODE_4998

Hr78-GFP 8-16 embryonic ChIP-seq Embryo 8-16 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Hr78-GFP [ALL]
target: Hormone-receptor-like in 78
Hr78 [ALL]
embargo expired
BindingSite: 1524   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3241

even skipped-GFP 8-16h embryo ChIP-seq Embryo 8-16 h [ALL]
odg-GFP [ALL] /
target: eGFP
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1033   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM594245
GEO: GSM594246


2 files Download data files
modENCODE_3240

E8-16 CG8478 Embryo 8-16 h [ALL]
KW3-CG8478-D1 [ALL] / CG8478
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1905   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E8-16_CG8478
GEO: GSM594225
GEO: GSM594226


2 files Download data files
modENCODE_4982

H 0-8h embryonic ChIP-seq Embryo 0-8 h [ALL]
KW3-h-D1 [ALL]
target: hairy
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 8958   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206858
GEO: GSM1206859
GEO: GSM1206860
GEO: GSM1206861


7 files Download data files
modENCODE_3402

15T 8-16 NW GFP Embryo 8-16 h [ALL]
odg-GFP [ALL] /
target: eGFP
hairy-GFP-P[acman]-15T [ALL]
embargo expired
ProteinBindingSite: 436   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM628255
GEO: GSM628256


2 files Download data files
modENCODE_4981

gro WPP ChIP-seq White prepupae (WPP) [ALL]
KW0:GRO [ALL]
target: groucho
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 11165   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206854
GEO: GSM1206855
GEO: GSM1206856
GEO: GSM1206857


7 files Download data files
modENCODE_3245

Trithorax-like Kc cells ChIP-seq KW3-Trl-D2 [ALL]
target: Trithorax-like
embargo expired
ProteinBindingSite: 3842   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM570052
GEO: GSM570054


2 files Download data files
modENCODE_3242

E8-16 hkb Embryo 8-16 h [ALL]
KW3-hkb-D1 [ALL]
target: huckebein
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1623   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E8-16_hkb
GEO: GSM569793
GEO: GSM569794


2 files Download data files
modENCODE_3393

E16-24h bon Embryo 16-24 h [ALL]
bon (GP37) [ALL]
target: bonus
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 745   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24h_bon
GEO: GSM636840
GEO: GSM636841


2 files Download data files
modENCODE_4976

Eip74EF-GFP 8-16h embryonic ChIP-seq Embryo 8-16 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Eip74EF-GFP [ALL]
target: Ecdysone-induced protein 74EF
Eip74EF [ALL]
embargo expired
BindingSite: 1929   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206850
GEO: GSM1206851
GEO: GSM1206852
GEO: GSM1206853


7 files Download data files
modENCODE_3394

E16-24h Kr-D2 Embryo 16-24 h [ALL]
KW3-Kr-D2 [ALL]
target: Kruppel
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 353   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24h_Kr-D2
GEO: GSM636835
GEO: GSM636836
GEO: GSM636837


2 files Download data files
modENCODE_4974

Dll WPP ChIP-seq White prepupae (WPP) [ALL]
dll [ALL]
target: Distal-less
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 16117   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GEO: GSM1206846
GEO: GSM1206847
GEO: GSM1206848
GEO: GSM1206849


7 files Download data files
modENCODE_3391

E16-24h HP1 Abcam Embryo 16-24 h [ALL]
HP1 antibody (ab24726) [ALL]
target: Heterochromatin Protein 1b
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 5212   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24h_HP1_Abcam
GEO: GSM628252
GEO: GSM628253


2 files Download data files
modENCODE_4967

cmi 0-8h embryonic ChIP-seq Embryo 0-8 h [ALL]
anti-Cmi [ALL]
target: Lost PHDs of trr
exd-GFP-13T [ALL]
target: extradenticle
embargo expired
BindingSite: 3110   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3392

E16-24h HP1 Covance Embryo 16-24 h [ALL]
HP1-Covance [ALL]
target: Heterochromatin Protein 1b
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 2148   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24h_HP1_Covance
GEO: GSM628251
GEO: GSM628253


2 files Download data files
modENCODE_3230

10T-W3L GFP L3 stage larvae [ALL]
odg-GFP [ALL] /
target: eGFP
10T-Dfd-GFP [ALL]
embargo expired
ProteinBindingSite: 3159   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: 10T-W3L_GFP
GEO: GSM569795
GEO: GSM569796
GEO: GSM569797


2 files Download data files
modENCODE_4962

Abd-B-GFP W3L ChIP-seq L3 stage larvae [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
Abd-B-GFP [ALL]
target: Abdominal B
Abd-B [ALL]
embargo expired
BindingSite: 4389   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4114

USP-GFP 0-12-seq Embryo 0-12 h [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
usp-GFP [ALL]
target: ultraspiracle
usp [ALL]
embargo expired
BindingSite: 1540   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3229

10T-E16-24h GFP Embryo 16-24 h [ALL]
odg-GFP [ALL] /
target: eGFP
FlyStrain:10T-DFD-GFP:KW:1&oldid=39548 [ALL]
embargo expired
ProteinBindingSite: 581   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: 10T-E16-24h_GFP
GEO: GSM569798
GEO: GSM569799


2 files Download data files
modENCODE_4107

TCF 16-24-seq Embryo 16-24 h [ALL]
anti-dTCF [ALL] /
target: pangolin
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1355   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_4113

USP-GFP WPP+12-seq White prepupae (WPP)+12 [ALL]
GFP_ab290 [ALL] /
target: Green Fluorescent Protein
usp-GFP [ALL]
target: ultraspiracle
usp [ALL]
embargo expired
BindingSite: 3791   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


9 files Download data files
modENCODE_3237

E0-8 Pcl Embryo 0-8 h [ALL]
KW4-PCL-D2 [ALL]
target: Polycomblike
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 2457   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: White_CS_SG_POLYCOMB
White_CS_SG_POLYCOMB
GEO: GSM569800
GEO: GSM569801


2 files Download data files
modENCODE_4103

Stat92E WPP-seq White prepupae (WPP) [ALL]
Rabbit anti-Stat92E (s1189-1) [ALL]
target: Signal-transducer and activator of transcription protein at 92E
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 487   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3239

E1-6 GFP[eve] Embryo 1-6 h [ALL]
odg-GFP [ALL] /
target: eGFP
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 304   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E1-6_GFP_eve
GEO: GSM594222
GEO: GSM594223
GEO: GSM594224


2 files Download data files
modENCODE_3238

E16-24 Trl Embryo 16-24 h [ALL]
KW3-Trl-D2 [ALL]
target: Trithorax-like
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 5195   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E16-24_Trl
GEO: GSM570043
GEO: GSM570044


2 files Download data files
modENCODE_4098

psq WPP-seq White prepupae (WPP) [ALL]
KW3-psq-D2 [ALL]
target: pipsqueak
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1661   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3232

E0-12 Sin3A Embryo 0-12 h [ALL]
Sin3A-RC [ALL]
target: Sin3A
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 4046   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E0-12_Sin3A
GEO: GSM569791
GEO: GSM569792


2 files Download data files
modENCODE_4099

sc 0-12-seq Embryo 0-12 h [ALL]
scute_guineapig_Crews [ALL]
target: scute
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 2136   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files
modENCODE_3234

E0-4 GFP[tll] Embryo 0-4 h [ALL]
odg-GFP [ALL] /
target: eGFP
yellow cinnabar brown speck [ALL]
embargo expired
ProteinBindingSite: 1454   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]
GBrowse tracks: E0-4_GFP_tll
GEO: GSM594213
GEO: GSM594214
GEO: GSM594215


2 files Download data files
modENCODE_4096

Prd-RF13 0-12-seq Embryo 0-12 h [ALL]
anti-Prd RF13 [ALL]
target: paired
yellow cinnabar brown speck [ALL]
embargo expired
BindingSite: 1155   export: TAB   CSV  GFF3  (for UCSC)  SEQ    create LIST
  [find nearby features]


7 files Download data files