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Capped and uncapped short RNAs

experiment: Capped and uncapped short RNAs project: The Drosophila Transcriptome PI: Sue Celniker Labs: Tom Gingeras
We are generating a comprehensive catalog of small RNAs below 200nt in length isolated from Drosophila melanogaster. These RNAs were selectively enriched for populations of RNAs with 5' monophosphate or cap modifications.

NO FEATURES GENERATED BY THIS EXPERIMENT All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 8 RNA-seq submissions for this experiment:
DCC id Name cell line Embargoed until Features, GBrowse and Data Files
modENCODE_3961


Related to: modENCODE_3885

ML-DmBG3.c2 5'monoP small-RNA max-200nt PolyA-tail RNA-seq ML-DmBG3-c2 [ALL]
embargo expired
GBrowse tracks: submission_3961.sorted
SRA: SRR316203
SRA: SRR316204


3 files Download data files
modENCODE_3962


Related to: modENCODE_3316
modENCODE_3885

W1-Cl.8+ 5'monoP small-RNA max-200nt PolyA-tail RNA-seq CME W1 Cl.8+ [ALL]
embargo expired
GBrowse tracks: submission_3962.sorted
SRA: SRR316205
SRA: SRR316206


3 files Download data files
modENCODE_3360


Related to: modENCODE_3316

Cl.8+ Capped small-RNA max-200nt PolyA-tail RNA-seq CME W1 Cl.8+ [ALL]
embargo expired
GBrowse tracks: submission_3360.sorted
SRA: SRR080774
SRA: SRR080775


3 files Download data files
modENCODE_3940


Related to: modENCODE_3316

Kc-167 5'monoP small-RNA max-200nt PolyA-tail RNA-seq Kc167 [ALL]
embargo expired
GBrowse tracks: submission_3940.sorted
SRA: SRR316202
SRA: SRR325179


3 files Download data files
modENCODE_3317


Related to: modENCODE_3316

ML-DmBG3.c2 Capped small-RNA max-200nt PolyA-tail RNA-seq ML-DmBG3-c2 [ALL]
embargo expired
GBrowse tracks: submission_3317.sorted
SRA: SRR080771
SRA: SRR080773


3 files Download data files
modENCODE_3831


Related to: modENCODE_3316
modENCODE_3885

S2-DRSC 5'monoP small-RNA max-200nt PolyA-tail RNA-seq S2-DRSC [ALL]
embargo expired
GBrowse tracks: submission_3831.sorted
SRA: SRR316200
SRA: SRR325178


3 files Download data files
modENCODE_3359


Related to: modENCODE_3316

Kc-167 Capped small-RNA max-200nt PolyA-tail RNA-seq Kc167 [ALL]
embargo expired
GBrowse tracks: submission_3359.sorted
SRA: SRR080770
SRA: SRR080772


3 files Download data files
modENCODE_3358


Related to: modENCODE_3316

S2-DRSC Capped small-RNA max-200nt PolyA-tail RNA-seq S2-DRSC [ALL]
embargo expired
GBrowse tracks: submission_3358.sorted
SRA: SRR080768
SRA: SRR080769


3 files Download data files