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Capped and uncapped short RNAs

experiment: Capped and uncapped short RNAs project: The Drosophila Transcriptome PI: Sue Celniker Labs: Tom Gingeras
We are generating a comprehensive catalog of small RNAs below 200nt in length isolated from Drosophila melanogaster. These RNAs were selectively enriched for populations of RNAs with 5' monophosphate or cap modifications.
There are 8 RNA-seq submissions for this experiment:
DCC id Name cell line Embargoed until Features, GBrowse and Data Files
modENCODE_3961


Related to: modENCODE_3885

ML-DmBG3.c2 5'monoP small-RNA max-200nt PolyA-tail RNA-seq ML-DmBG3-c2 [ALL]
embargo expired SRA: SRR316203
SRA: SRR316204


3 files Download data files
modENCODE_3962


Related to: modENCODE_3316
modENCODE_3885

W1-Cl.8+ 5'monoP small-RNA max-200nt PolyA-tail RNA-seq CME W1 Cl.8+ [ALL]
embargo expired SRA: SRR316205
SRA: SRR316206


3 files Download data files
modENCODE_3360


Related to: modENCODE_3316

Cl.8+ Capped small-RNA max-200nt PolyA-tail RNA-seq CME W1 Cl.8+ [ALL]
embargo expired SRA: SRR080774
SRA: SRR080775


3 files Download data files
modENCODE_3940


Related to: modENCODE_3316

Kc-167 5'monoP small-RNA max-200nt PolyA-tail RNA-seq Kc167 [ALL]
embargo expired SRA: SRR316202
SRA: SRR325179


3 files Download data files
modENCODE_3317


Related to: modENCODE_3316

ML-DmBG3.c2 Capped small-RNA max-200nt PolyA-tail RNA-seq ML-DmBG3-c2 [ALL]
embargo expired SRA: SRR080771
SRA: SRR080773


3 files Download data files
modENCODE_3831


Related to: modENCODE_3316
modENCODE_3885

S2-DRSC 5'monoP small-RNA max-200nt PolyA-tail RNA-seq S2-DRSC [ALL]
embargo expired SRA: SRR316200
SRA: SRR325178


3 files Download data files
modENCODE_3359


Related to: modENCODE_3316

Kc-167 Capped small-RNA max-200nt PolyA-tail RNA-seq Kc167 [ALL]
embargo expired SRA: SRR080770
SRA: SRR080772


3 files Download data files
modENCODE_3358


Related to: modENCODE_3316

S2-DRSC Capped small-RNA max-200nt PolyA-tail RNA-seq S2-DRSC [ALL]
embargo expired SRA: SRR080768
SRA: SRR080769


3 files Download data files