modMine: Experiments

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Capped and uncapped short RNAs

	experiment: Capped and uncapped short RNAs	project: The Drosophila Transcriptome	PI: Sue Celniker	Labs: Tom Gingeras
We are generating a comprehensive catalog of small RNAs below 200nt in length isolated from Drosophila melanogaster. These RNAs were selectively enriched for populations of RNAs with 5' monophosphate or cap modifications.

There are 8 RNA-seq submissions for this experiment:

	DCC id	Name	cell line	Embargoed until	Features, GBrowse and Data Files
	modENCODE_3961 Related to: modENCODE_3885	ML-DmBG3.c2 5'monoP small-RNA max-200nt PolyA-tail RNA-seq	ML-DmBG3-c2 [ALL]	embargo expired	SRA: SRR316203 SRA: SRR316204 3 files Download data files
	modENCODE_3962 Related to: modENCODE_3316 modENCODE_3885	W1-Cl.8+ 5'monoP small-RNA max-200nt PolyA-tail RNA-seq	CME W1 Cl.8+ [ALL]	embargo expired	SRA: SRR316205 SRA: SRR316206 3 files Download data files
	modENCODE_3360 Related to: modENCODE_3316	Cl.8+ Capped small-RNA max-200nt PolyA-tail RNA-seq	CME W1 Cl.8+ [ALL]	embargo expired	SRA: SRR080774 SRA: SRR080775 3 files Download data files
	modENCODE_3940 Related to: modENCODE_3316	Kc-167 5'monoP small-RNA max-200nt PolyA-tail RNA-seq	Kc167 [ALL]	embargo expired	SRA: SRR316202 SRA: SRR325179 3 files Download data files
	modENCODE_3317 Related to: modENCODE_3316	ML-DmBG3.c2 Capped small-RNA max-200nt PolyA-tail RNA-seq	ML-DmBG3-c2 [ALL]	embargo expired	SRA: SRR080771 SRA: SRR080773 3 files Download data files
	modENCODE_3831 Related to: modENCODE_3316 modENCODE_3885	S2-DRSC 5'monoP small-RNA max-200nt PolyA-tail RNA-seq	S2-DRSC [ALL]	embargo expired	SRA: SRR316200 SRA: SRR325178 3 files Download data files
	modENCODE_3359 Related to: modENCODE_3316	Kc-167 Capped small-RNA max-200nt PolyA-tail RNA-seq	Kc167 [ALL]	embargo expired	SRA: SRR080770 SRA: SRR080772 3 files Download data files
	modENCODE_3358 Related to: modENCODE_3316	S2-DRSC Capped small-RNA max-200nt PolyA-tail RNA-seq	S2-DRSC [ALL]	embargo expired	SRA: SRR080768 SRA: SRR080769 3 files Download data files

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