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C-tailed RNA-Seq of Drosophila Cell lines and stages

experiment: C-tailed RNA-Seq of Drosophila Cell lines and stages project: The Drosophila Transcriptome PI: Sue Celniker Labs: Tom Gingeras
We are using C-tailed RNA-Seq to characterize the transcriptome in various Drosophila cell lines. We then sequence each library using an Illumina Genome Analyzer II.

NO FEATURES GENERATED BY THIS EXPERIMENT All GBrowse tracks generated for this experiment:
GBrowse tracks: by chromosome
All entries in public repositories generated by this experiment
There are 6 RNA-seq submissions for this experiment:
DCC id Name developmental stage cell line strain Embargoed until Features, GBrowse and Data Files
modENCODE_360


Related to: modENCODE_555

Dm Kc167 m200 Tap RiboM C-tailed RNA-Seq NexAlign Kc167 [ALL]
embargo expired
GBrowse tracks: KC167_Total_m200_Tap_RiboM_ExactUniq_TR1-2.sam.bam.sorted
GEO: GSM451044
GEO: GSM451045
GEO: GSM451046
GEO: GSM451047


2 files Download data files
modENCODE_362


Related to: modENCODE_555

Dm S2-DRSC m200 Tap RiboM C-tailed RNA-Seq NexAlign S2-DRSC [ALL]
embargo expired
GBrowse tracks: S2-DRSC_Total_m200_Tap_RiboM_ExactUniq_TR1-4.sam.bam.sorted
GEO: GSM451127
GEO: GSM451128
GEO: GSM451129
GEO: GSM451130
GEO: GSM451131
...All entries in public repositories generated by this submission



2 files Download data files
modENCODE_343


Related to: modENCODE_574

Dm embryo 16-18h C-tailed RNA-Seq NexAlign Embryo 16-18 h [ALL]
yellow cinnabar brown speck [ALL]
embargo expired
GBrowse tracks: DM16-18h.sorted
GEO: GSM439966


1 files Download data files
modENCODE_364


Related to: modENCODE_555

Dm Cl.8 m200 Tap RiboM C-tailed RNA-Seq NexAlign CME W1 Cl.8+ [ALL]
embargo expired
GBrowse tracks: CME_W1_Cl8_Total_m200_Tap_RiboM_ExactUniq_TR1
GEO: GSM451031
GEO: GSM451032
GEO: GSM451033
GEO: GSM451034
GEO: GSM451035
...All entries in public repositories generated by this submission



2 files Download data files
modENCODE_366


Related to: modENCODE_555

Dm BG3-c2 m200 Tap RiboM C-tailed RNA-Seq NexAlign ML-DmBG3-c2 [ALL]
embargo expired
GBrowse tracks: ML_BG3-c2_Total_m200_Tap_RiboM_ExactUniq_TR1.sam.bam.sorted
GEO: GSM450972
GEO: GSM450973
GEO: GSM450974


2 files Download data files
modENCODE_342


Related to: modENCODE_555

Dm Kc167 Poly-Ap p200 467 C-tailed RNA-Seq Nexalign Kc167 [ALL]
embargo expired
GBrowse tracks: KC167_Total_Ap_p200_Tap_467_ExactUniq_BR1_TR1-8.sam.bam.sorted
GEO: GSM451119
GEO: GSM451120
GEO: GSM451121
GEO: GSM451122
GEO: GSM451123
...All entries in public repositories generated by this submission



1 files Download data files