modENCODE |  Help |  blog
lists icon

List Analysis for FlyAtlas top testis (42 Genes)

Description: List of the most enriched genes in the fly testis (Source:
Date Created: 1311346406200

Drosophila melanogaster Gene Expression Scores

These expression levels are derived from RNA-seq data from the Celniker group and are log2 of the actual value.
Heatmap visualization powered by canvasXpress, learn more about the display options.

Click to see/hide the expression maps

Cell Line Clustering - Hierarchical: and K-means:
Developmental Stage Clustering - Hierarchical: and K-means:

More Information

This heatmap shows estimated expression levels for annotated genes, using signals from Affymetrix Drosophila tiling arrays. The arrays were hybridized with total RNAs extracted from 25 cell lines and 30 developmental stages. The original gene scores table provides expression scores for all genes listed in the FlyBase version 5.12 annotation. Each gene was assigned a score equal to the maximum exon score for all the exons associated with the gene in the annotation. That is, we made no effort to derive distinct scores for known isoforms. [Note: Some exons are annotated as components of more than one genes. Such exons are represented in more than one row, with different values for geneID, geneName and FBgn.] IMPORTANT: Hybridization efficiencies vary significantly from probe to probe and exon to exon. Consequently, the data in these tables are useful for comparing a single gene in multiple RNA samples (i.e. you may compare scores within a row). But they are NOT useful for comparing different genes or exons from a single RNA sample (i.e. do NOT try to compare scores within a column).
Further information: check the modENCODE submission, with links to the original score files for genes and exons.

 Convert to a different type



    View homologues in other Mines:


    External Links

    The template queries below have been executed for this list.